Protein–RNA interactions for Protein: Q96BD0

SLCO4A1, Solute carrier organic anion transporter family member 4A1, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLCO4A1Q96BD0 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SLCO4A1Q96BD0 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLCO4A1Q96BD0 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.63■□□□□ 0.25
SLCO4A1Q96BD0 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLCO4A1Q96BD0 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLCO4A1Q96BD0 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.63■□□□□ 0.25
SLCO4A1Q96BD0 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLCO4A1Q96BD0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
SLCO4A1Q96BD0 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLCO4A1Q96BD0 CA15P1-201ENST00000481698 905 ntBASIC16.63■□□□□ 0.25
SLCO4A1Q96BD0 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SLCO4A1Q96BD0 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLCO4A1Q96BD0 AC009065.1-201ENST00000564055 1225 ntBASIC16.63■□□□□ 0.25
SLCO4A1Q96BD0 MIR3180-4-201ENST00000582223 153 ntBASIC16.63■□□□□ 0.25
SLCO4A1Q96BD0 AF186192.3-201ENST00000583427 947 ntBASIC16.63■□□□□ 0.25
SLCO4A1Q96BD0 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SLCO4A1Q96BD0 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
SLCO4A1Q96BD0 AC073195.1-201ENST00000607241 877 ntBASIC16.63■□□□□ 0.25
SLCO4A1Q96BD0 FAM197Y4-202ENST00000622692 608 ntBASIC16.63■□□□□ 0.25
SLCO4A1Q96BD0 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
SLCO4A1Q96BD0 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLCO4A1Q96BD0 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SLCO4A1Q96BD0 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLCO4A1Q96BD0 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLCO4A1Q96BD0 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.63■□□□□ 0.25
SLCO4A1Q96BD0 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLCO4A1Q96BD0 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SLCO4A1Q96BD0 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLCO4A1Q96BD0 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLCO4A1Q96BD0 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.61■□□□□ 0.25
SLCO4A1Q96BD0 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
SLCO4A1Q96BD0 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLCO4A1Q96BD0 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLCO4A1Q96BD0 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLCO4A1Q96BD0 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLCO4A1Q96BD0 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SLCO4A1Q96BD0 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.61■□□□□ 0.25
SLCO4A1Q96BD0 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLCO4A1Q96BD0 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLCO4A1Q96BD0 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SLCO4A1Q96BD0 AC078925.2-201ENST00000624013 1973 ntBASIC16.61■□□□□ 0.25
SLCO4A1Q96BD0 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLCO4A1Q96BD0 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SLCO4A1Q96BD0 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLCO4A1Q96BD0 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLCO4A1Q96BD0 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.61■□□□□ 0.25
SLCO4A1Q96BD0 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.61■□□□□ 0.25
SLCO4A1Q96BD0 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.61■□□□□ 0.25
SLCO4A1Q96BD0 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.61■□□□□ 0.25
SLCO4A1Q96BD0 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
SLCO4A1Q96BD0 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.61■□□□□ 0.25
SLCO4A1Q96BD0 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.61■□□□□ 0.25
SLCO4A1Q96BD0 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLCO4A1Q96BD0 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.61■□□□□ 0.25
SLCO4A1Q96BD0 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLCO4A1Q96BD0 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
SLCO4A1Q96BD0 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLCO4A1Q96BD0 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms