Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC23.16■■□□□ 1.3
RAPGEF4Q8WZA2 IGHV3-52-201ENST00000519770 353 ntBASIC23.16■■□□□ 1.3
RAPGEF4Q8WZA2 CD63-210ENST00000550776 870 ntTSL 5 BASIC23.16■■□□□ 1.3
RAPGEF4Q8WZA2 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC23.16■■□□□ 1.3
RAPGEF4Q8WZA2 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC23.16■■□□□ 1.3
RAPGEF4Q8WZA2 AC010654.1-201ENST00000615722 808 ntBASIC23.16■■□□□ 1.3
RAPGEF4Q8WZA2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
RAPGEF4Q8WZA2 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
RAPGEF4Q8WZA2 GPR89P-201ENST00000407924 1495 ntBASIC23.16■■□□□ 1.3
RAPGEF4Q8WZA2 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RAPGEF4Q8WZA2 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RAPGEF4Q8WZA2 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RAPGEF4Q8WZA2 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC23.16■■□□□ 1.3
RAPGEF4Q8WZA2 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RAPGEF4Q8WZA2 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC23.15■■□□□ 1.3
RAPGEF4Q8WZA2 AC009949.1-201ENST00000623048 1830 ntBASIC23.15■■□□□ 1.3
RAPGEF4Q8WZA2 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC23.15■■□□□ 1.3
RAPGEF4Q8WZA2 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC23.15■■□□□ 1.3
RAPGEF4Q8WZA2 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
RAPGEF4Q8WZA2 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RAPGEF4Q8WZA2 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC23.15■■□□□ 1.3
RAPGEF4Q8WZA2 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RAPGEF4Q8WZA2 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RAPGEF4Q8WZA2 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RAPGEF4Q8WZA2 MRPL20P1-201ENST00000400819 433 ntBASIC23.15■■□□□ 1.3
RAPGEF4Q8WZA2 IGLL3P-201ENST00000412472 434 ntBASIC23.15■■□□□ 1.3
RAPGEF4Q8WZA2 CIPC-205ENST00000555437 566 ntTSL 3 BASIC23.15■■□□□ 1.3
RAPGEF4Q8WZA2 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC23.15■■□□□ 1.3
RAPGEF4Q8WZA2 AL078644.1-201ENST00000609881 752 ntBASIC23.15■■□□□ 1.3
RAPGEF4Q8WZA2 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC23.15■■□□□ 1.3
RAPGEF4Q8WZA2 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
RAPGEF4Q8WZA2 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
RAPGEF4Q8WZA2 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RAPGEF4Q8WZA2 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RAPGEF4Q8WZA2 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC23.15■■□□□ 1.3
RAPGEF4Q8WZA2 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RAPGEF4Q8WZA2 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
RAPGEF4Q8WZA2 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RAPGEF4Q8WZA2 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC23.14■■□□□ 1.3
RAPGEF4Q8WZA2 AC097637.2-201ENST00000624096 1997 ntBASIC23.14■■□□□ 1.3
RAPGEF4Q8WZA2 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
RAPGEF4Q8WZA2 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RAPGEF4Q8WZA2 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RAPGEF4Q8WZA2 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC23.14■■□□□ 1.3
RAPGEF4Q8WZA2 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
RAPGEF4Q8WZA2 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC23.14■■□□□ 1.3
RAPGEF4Q8WZA2 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC23.14■■□□□ 1.29
RAPGEF4Q8WZA2 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RAPGEF4Q8WZA2 ATP6V0CP3-201ENST00000417255 467 ntBASIC23.14■■□□□ 1.29
RAPGEF4Q8WZA2 MKNK2P1-201ENST00000437526 628 ntBASIC23.14■■□□□ 1.29
RAPGEF4Q8WZA2 DDX43P3-201ENST00000441064 443 ntBASIC23.14■■□□□ 1.29
RAPGEF4Q8WZA2 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC23.14■■□□□ 1.29
RAPGEF4Q8WZA2 RIN3-211ENST00000557762 517 ntTSL 3 BASIC23.14■■□□□ 1.29
RAPGEF4Q8WZA2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RAPGEF4Q8WZA2 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RAPGEF4Q8WZA2 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RAPGEF4Q8WZA2 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC23.14■■□□□ 1.29
RAPGEF4Q8WZA2 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
RAPGEF4Q8WZA2 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RAPGEF4Q8WZA2 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC23.13■■□□□ 1.29
RAPGEF4Q8WZA2 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
RAPGEF4Q8WZA2 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RAPGEF4Q8WZA2 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RAPGEF4Q8WZA2 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RAPGEF4Q8WZA2 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
RAPGEF4Q8WZA2 CD82-202ENST00000342935 967 ntTSL 5 BASIC23.13■■□□□ 1.29
RAPGEF4Q8WZA2 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
RAPGEF4Q8WZA2 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
RAPGEF4Q8WZA2 PTCHD3P3-201ENST00000403073 906 ntBASIC23.13■■□□□ 1.29
RAPGEF4Q8WZA2 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC23.13■■□□□ 1.29
RAPGEF4Q8WZA2 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC23.13■■□□□ 1.29
RAPGEF4Q8WZA2 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
RAPGEF4Q8WZA2 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC23.13■■□□□ 1.29
RAPGEF4Q8WZA2 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC23.13■■□□□ 1.29
RAPGEF4Q8WZA2 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC23.13■■□□□ 1.29
RAPGEF4Q8WZA2 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RAPGEF4Q8WZA2 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
RAPGEF4Q8WZA2 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
RAPGEF4Q8WZA2 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RAPGEF4Q8WZA2 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
RAPGEF4Q8WZA2 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
RAPGEF4Q8WZA2 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC23.13■■□□□ 1.29
RAPGEF4Q8WZA2 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC23.13■■□□□ 1.29
RAPGEF4Q8WZA2 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
RAPGEF4Q8WZA2 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
RAPGEF4Q8WZA2 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
RAPGEF4Q8WZA2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RAPGEF4Q8WZA2 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
RAPGEF4Q8WZA2 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RAPGEF4Q8WZA2 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RAPGEF4Q8WZA2 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
RAPGEF4Q8WZA2 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC23.12■■□□□ 1.29
RAPGEF4Q8WZA2 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC23.12■■□□□ 1.29
RAPGEF4Q8WZA2 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC23.12■■□□□ 1.29
RAPGEF4Q8WZA2 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC23.12■■□□□ 1.29
RAPGEF4Q8WZA2 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC23.12■■□□□ 1.29
RAPGEF4Q8WZA2 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC23.12■■□□□ 1.29
RAPGEF4Q8WZA2 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC23.12■■□□□ 1.29
RAPGEF4Q8WZA2 AC009336.1-201ENST00000608941 1553 ntBASIC23.12■■□□□ 1.29
RAPGEF4Q8WZA2 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms