Protein–RNA interactions for Protein: Q8WXC6

COPS9, COP9 signalosome complex subunit 9, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9Q8WXC6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 HLA-J-201ENST00000462773 1622 ntBASIC12.01□□□□□ -0.49
COPS9Q8WXC6 AC093010.1-201ENST00000473625 1624 ntBASIC12.01□□□□□ -0.49
COPS9Q8WXC6 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 ENSA-205ENST00000361532 792 ntTSL 2 BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 KIRREL3-AS3-201ENST00000404882 831 ntBASIC12.01□□□□□ -0.49
COPS9Q8WXC6 SERPINH1P1-201ENST00000419794 1249 ntBASIC12.01□□□□□ -0.49
COPS9Q8WXC6 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 AL031432.3-201ENST00000607698 485 ntBASIC12.01□□□□□ -0.49
COPS9Q8WXC6 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 AL121829.2-201ENST00000620908 328 ntBASIC12.01□□□□□ -0.49
COPS9Q8WXC6 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
COPS9Q8WXC6 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
COPS9Q8WXC6 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC12□□□□□ -0.49
COPS9Q8WXC6 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC12□□□□□ -0.49
COPS9Q8WXC6 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC12□□□□□ -0.49
COPS9Q8WXC6 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
COPS9Q8WXC6 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
COPS9Q8WXC6 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
COPS9Q8WXC6 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC12□□□□□ -0.49
COPS9Q8WXC6 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
COPS9Q8WXC6 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12□□□□□ -0.49
COPS9Q8WXC6 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC12□□□□□ -0.49
COPS9Q8WXC6 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
COPS9Q8WXC6 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
COPS9Q8WXC6 MFF-205ENST00000354503 1085 ntTSL 2 BASIC12□□□□□ -0.49
COPS9Q8WXC6 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC12□□□□□ -0.49
COPS9Q8WXC6 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
COPS9Q8WXC6 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC12□□□□□ -0.49
COPS9Q8WXC6 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC12□□□□□ -0.49
COPS9Q8WXC6 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC12□□□□□ -0.49
COPS9Q8WXC6 SPI1-203ENST00000533030 661 ntTSL 2 BASIC12□□□□□ -0.49
COPS9Q8WXC6 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
COPS9Q8WXC6 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
COPS9Q8WXC6 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC12□□□□□ -0.49
COPS9Q8WXC6 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC12□□□□□ -0.49
COPS9Q8WXC6 AC116407.2-201ENST00000613639 860 ntBASIC12□□□□□ -0.49
COPS9Q8WXC6 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC12□□□□□ -0.49
COPS9Q8WXC6 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
COPS9Q8WXC6 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
COPS9Q8WXC6 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
COPS9Q8WXC6 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
COPS9Q8WXC6 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC12□□□□□ -0.49
COPS9Q8WXC6 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC12□□□□□ -0.49
COPS9Q8WXC6 AC105020.1-201ENST00000435356 2205 ntBASIC12□□□□□ -0.49
COPS9Q8WXC6 PCDHA14-201ENST00000506751 2298 ntBASIC12□□□□□ -0.49
COPS9Q8WXC6 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12□□□□□ -0.49
COPS9Q8WXC6 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
COPS9Q8WXC6 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
COPS9Q8WXC6 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
COPS9Q8WXC6 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
COPS9Q8WXC6 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
COPS9Q8WXC6 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
COPS9Q8WXC6 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC12□□□□□ -0.49
COPS9Q8WXC6 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
COPS9Q8WXC6 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
COPS9Q8WXC6 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
COPS9Q8WXC6 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC12□□□□□ -0.49
COPS9Q8WXC6 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC12□□□□□ -0.49
COPS9Q8WXC6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC12□□□□□ -0.49
COPS9Q8WXC6 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
COPS9Q8WXC6 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms