Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
U2AF1L4Q8WU68 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
U2AF1L4Q8WU68 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
U2AF1L4Q8WU68 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
U2AF1L4Q8WU68 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
U2AF1L4Q8WU68 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
U2AF1L4Q8WU68 CNN2P11-201ENST00000429351 262 ntBASIC20.28■□□□□ 0.84
U2AF1L4Q8WU68 KRT18P2-201ENST00000447938 1258 ntBASIC20.28■□□□□ 0.84
U2AF1L4Q8WU68 COX20P2-201ENST00000452636 358 ntBASIC20.28■□□□□ 0.84
U2AF1L4Q8WU68 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
U2AF1L4Q8WU68 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.28■□□□□ 0.84
U2AF1L4Q8WU68 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.28■□□□□ 0.84
U2AF1L4Q8WU68 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.28■□□□□ 0.84
U2AF1L4Q8WU68 AC009154.2-201ENST00000621177 724 ntBASIC20.28■□□□□ 0.84
U2AF1L4Q8WU68 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
U2AF1L4Q8WU68 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
U2AF1L4Q8WU68 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
U2AF1L4Q8WU68 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.28■□□□□ 0.84
U2AF1L4Q8WU68 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
U2AF1L4Q8WU68 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
U2AF1L4Q8WU68 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
U2AF1L4Q8WU68 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.27■□□□□ 0.84
U2AF1L4Q8WU68 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
U2AF1L4Q8WU68 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
U2AF1L4Q8WU68 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.27■□□□□ 0.84
U2AF1L4Q8WU68 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
U2AF1L4Q8WU68 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
U2AF1L4Q8WU68 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.27■□□□□ 0.84
U2AF1L4Q8WU68 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.27■□□□□ 0.84
U2AF1L4Q8WU68 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
U2AF1L4Q8WU68 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
U2AF1L4Q8WU68 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
U2AF1L4Q8WU68 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
U2AF1L4Q8WU68 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
U2AF1L4Q8WU68 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.27■□□□□ 0.84
U2AF1L4Q8WU68 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
U2AF1L4Q8WU68 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
U2AF1L4Q8WU68 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
U2AF1L4Q8WU68 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
U2AF1L4Q8WU68 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.27■□□□□ 0.84
U2AF1L4Q8WU68 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC20.27■□□□□ 0.84
U2AF1L4Q8WU68 WBP2-203ENST00000433525 928 ntTSL 2 BASIC20.27■□□□□ 0.84
U2AF1L4Q8WU68 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.27■□□□□ 0.84
U2AF1L4Q8WU68 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.27■□□□□ 0.84
U2AF1L4Q8WU68 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
U2AF1L4Q8WU68 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
U2AF1L4Q8WU68 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
U2AF1L4Q8WU68 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
U2AF1L4Q8WU68 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
U2AF1L4Q8WU68 AC090164.3-201ENST00000610780 2143 ntBASIC20.27■□□□□ 0.84
U2AF1L4Q8WU68 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
U2AF1L4Q8WU68 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.27■□□□□ 0.84
U2AF1L4Q8WU68 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
U2AF1L4Q8WU68 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
U2AF1L4Q8WU68 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.27■□□□□ 0.84
U2AF1L4Q8WU68 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
U2AF1L4Q8WU68 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
U2AF1L4Q8WU68 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
U2AF1L4Q8WU68 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
U2AF1L4Q8WU68 AC007613.1-201ENST00000572811 2597 ntBASIC20.27■□□□□ 0.83
U2AF1L4Q8WU68 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
U2AF1L4Q8WU68 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
U2AF1L4Q8WU68 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC20.27■□□□□ 0.83
U2AF1L4Q8WU68 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
U2AF1L4Q8WU68 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.26■□□□□ 0.83
U2AF1L4Q8WU68 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
U2AF1L4Q8WU68 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
U2AF1L4Q8WU68 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.26■□□□□ 0.83
U2AF1L4Q8WU68 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
U2AF1L4Q8WU68 HCG11-201ENST00000411553 5696 ntBASIC20.26■□□□□ 0.83
U2AF1L4Q8WU68 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC20.26■□□□□ 0.83
U2AF1L4Q8WU68 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC20.26■□□□□ 0.83
U2AF1L4Q8WU68 MIR1199-201ENST00000621445 119 ntBASIC20.26■□□□□ 0.83
U2AF1L4Q8WU68 ANO7L1-203ENST00000602586 1720 ntBASIC20.26■□□□□ 0.83
U2AF1L4Q8WU68 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
U2AF1L4Q8WU68 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
U2AF1L4Q8WU68 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
U2AF1L4Q8WU68 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.26■□□□□ 0.83
U2AF1L4Q8WU68 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.26■□□□□ 0.83
U2AF1L4Q8WU68 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
U2AF1L4Q8WU68 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
U2AF1L4Q8WU68 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.26■□□□□ 0.83
U2AF1L4Q8WU68 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
U2AF1L4Q8WU68 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
U2AF1L4Q8WU68 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
U2AF1L4Q8WU68 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
U2AF1L4Q8WU68 AC097374.2-201ENST00000618617 1306 ntBASIC20.26■□□□□ 0.83
U2AF1L4Q8WU68 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.26■□□□□ 0.83
U2AF1L4Q8WU68 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.26■□□□□ 0.83
U2AF1L4Q8WU68 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
U2AF1L4Q8WU68 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC20.25■□□□□ 0.83
U2AF1L4Q8WU68 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
U2AF1L4Q8WU68 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
U2AF1L4Q8WU68 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
U2AF1L4Q8WU68 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
U2AF1L4Q8WU68 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.25■□□□□ 0.83
U2AF1L4Q8WU68 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
U2AF1L4Q8WU68 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.25■□□□□ 0.83
U2AF1L4Q8WU68 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
U2AF1L4Q8WU68 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms