Protein–RNA interactions for Protein: Q8NDV7

TNRC6A, Trinucleotide repeat-containing gene 6A protein, humanhuman

Known RBP Predictions only

Length 1,962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6AQ8NDV7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TNRC6AQ8NDV7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.08■□□□□ 0.16
TNRC6AQ8NDV7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TNRC6AQ8NDV7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TNRC6AQ8NDV7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TNRC6AQ8NDV7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.08■□□□□ 0.16
TNRC6AQ8NDV7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TNRC6AQ8NDV7 KRT18P28-201ENST00000453838 1332 ntBASIC16.08■□□□□ 0.16
TNRC6AQ8NDV7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TNRC6AQ8NDV7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TNRC6AQ8NDV7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TNRC6AQ8NDV7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TNRC6AQ8NDV7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TNRC6AQ8NDV7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TNRC6AQ8NDV7 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 KRT19P2-202ENST00000557173 1012 ntBASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 SNHG9-202ENST00000564014 471 ntBASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 AL589182.2-201ENST00000619332 1049 ntBASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 AC004706.3-202ENST00000621574 984 ntBASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TNRC6AQ8NDV7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TNRC6AQ8NDV7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TNRC6AQ8NDV7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TNRC6AQ8NDV7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TNRC6AQ8NDV7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TNRC6AQ8NDV7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
TNRC6AQ8NDV7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TNRC6AQ8NDV7 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.06■□□□□ 0.16
TNRC6AQ8NDV7 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TNRC6AQ8NDV7 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TNRC6AQ8NDV7 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.06■□□□□ 0.16
TNRC6AQ8NDV7 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.06■□□□□ 0.16
TNRC6AQ8NDV7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.06■□□□□ 0.16
TNRC6AQ8NDV7 PDPK2P-202ENST00000562415 1191 ntBASIC16.06■□□□□ 0.16
TNRC6AQ8NDV7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.06■□□□□ 0.16
TNRC6AQ8NDV7 AC011467.4-201ENST00000594891 528 ntBASIC16.06■□□□□ 0.16
TNRC6AQ8NDV7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TNRC6AQ8NDV7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TNRC6AQ8NDV7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TNRC6AQ8NDV7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TNRC6AQ8NDV7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.06■□□□□ 0.16
TNRC6AQ8NDV7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TNRC6AQ8NDV7 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TNRC6AQ8NDV7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TNRC6AQ8NDV7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TNRC6AQ8NDV7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TNRC6AQ8NDV7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TNRC6AQ8NDV7 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.06■□□□□ 0.16
TNRC6AQ8NDV7 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
TNRC6AQ8NDV7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TNRC6AQ8NDV7 AL035633.1-201ENST00000406139 838 ntBASIC16.06■□□□□ 0.16
TNRC6AQ8NDV7 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms