Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.7■□□□□ 0.26
SLC38A9Q8NBW4 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC38A9Q8NBW4 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC38A9Q8NBW4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC38A9Q8NBW4 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SLC38A9Q8NBW4 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.7■□□□□ 0.26
SLC38A9Q8NBW4 AC073592.5-201ENST00000624854 528 ntBASIC16.7■□□□□ 0.26
SLC38A9Q8NBW4 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.7■□□□□ 0.26
SLC38A9Q8NBW4 AL022326.1-202ENST00000641533 845 ntBASIC16.7■□□□□ 0.26
SLC38A9Q8NBW4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC38A9Q8NBW4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC38A9Q8NBW4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SLC38A9Q8NBW4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SLC38A9Q8NBW4 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC38A9Q8NBW4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC38A9Q8NBW4 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC38A9Q8NBW4 AC104109.2-201ENST00000602919 1418 ntBASIC16.7■□□□□ 0.26
SLC38A9Q8NBW4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC38A9Q8NBW4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC38A9Q8NBW4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC38A9Q8NBW4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC38A9Q8NBW4 AL353593.2-201ENST00000602529 1483 ntBASIC16.69■□□□□ 0.26
SLC38A9Q8NBW4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC38A9Q8NBW4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
SLC38A9Q8NBW4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC38A9Q8NBW4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC38A9Q8NBW4 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC38A9Q8NBW4 AC132938.5-201ENST00000624980 1813 ntBASIC16.69■□□□□ 0.26
SLC38A9Q8NBW4 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC38A9Q8NBW4 MIR940-201ENST00000401276 94 ntBASIC16.69■□□□□ 0.26
SLC38A9Q8NBW4 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SLC38A9Q8NBW4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SLC38A9Q8NBW4 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.69■□□□□ 0.26
SLC38A9Q8NBW4 AC145285.3-201ENST00000564603 959 ntBASIC16.69■□□□□ 0.26
SLC38A9Q8NBW4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC38A9Q8NBW4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC38A9Q8NBW4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC38A9Q8NBW4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SLC38A9Q8NBW4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC38A9Q8NBW4 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SLC38A9Q8NBW4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC38A9Q8NBW4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC38A9Q8NBW4 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SLC38A9Q8NBW4 SIGLEC16-201ENST00000599858 1437 ntBASIC16.69■□□□□ 0.26
SLC38A9Q8NBW4 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC38A9Q8NBW4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC38A9Q8NBW4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SLC38A9Q8NBW4 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC38A9Q8NBW4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC38A9Q8NBW4 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC38A9Q8NBW4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC38A9Q8NBW4 ZNF259P1-201ENST00000407656 1365 ntBASIC16.68■□□□□ 0.26
SLC38A9Q8NBW4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC38A9Q8NBW4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.68■□□□□ 0.26
SLC38A9Q8NBW4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC38A9Q8NBW4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC38A9Q8NBW4 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC38A9Q8NBW4 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SLC38A9Q8NBW4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.68■□□□□ 0.26
SLC38A9Q8NBW4 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC38A9Q8NBW4 PRYP5-201ENST00000451909 266 ntBASIC16.68■□□□□ 0.26
SLC38A9Q8NBW4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
SLC38A9Q8NBW4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.68■□□□□ 0.26
SLC38A9Q8NBW4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.68■□□□□ 0.26
SLC38A9Q8NBW4 AC105339.3-201ENST00000560043 636 ntBASIC16.68■□□□□ 0.26
SLC38A9Q8NBW4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.68■□□□□ 0.26
SLC38A9Q8NBW4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.68■□□□□ 0.26
SLC38A9Q8NBW4 AC006538.3-201ENST00000612495 578 ntBASIC16.68■□□□□ 0.26
SLC38A9Q8NBW4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.68■□□□□ 0.26
SLC38A9Q8NBW4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC38A9Q8NBW4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC38A9Q8NBW4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.68■□□□□ 0.26
SLC38A9Q8NBW4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC38A9Q8NBW4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC38A9Q8NBW4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SLC38A9Q8NBW4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC38A9Q8NBW4 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC38A9Q8NBW4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC38A9Q8NBW4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC38A9Q8NBW4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
SLC38A9Q8NBW4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC38A9Q8NBW4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC38A9Q8NBW4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.67■□□□□ 0.26
SLC38A9Q8NBW4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC38A9Q8NBW4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.67■□□□□ 0.26
SLC38A9Q8NBW4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC38A9Q8NBW4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC38A9Q8NBW4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SLC38A9Q8NBW4 AC148477.5-201ENST00000625164 1645 ntBASIC16.67■□□□□ 0.26
SLC38A9Q8NBW4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC38A9Q8NBW4 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.67■□□□□ 0.26
SLC38A9Q8NBW4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.67■□□□□ 0.26
SLC38A9Q8NBW4 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC38A9Q8NBW4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC38A9Q8NBW4 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC38A9Q8NBW4 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC38A9Q8NBW4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.67■□□□□ 0.26
SLC38A9Q8NBW4 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC38A9Q8NBW4 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.67■□□□□ 0.26
SLC38A9Q8NBW4 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms