Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDH20Q8N6Y1 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PCDH20Q8N6Y1 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCDH20Q8N6Y1 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.14■□□□□ 0.5
PCDH20Q8N6Y1 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCDH20Q8N6Y1 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCDH20Q8N6Y1 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.14■□□□□ 0.5
PCDH20Q8N6Y1 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH20Q8N6Y1 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH20Q8N6Y1 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDH20Q8N6Y1 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH20Q8N6Y1 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH20Q8N6Y1 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDH20Q8N6Y1 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH20Q8N6Y1 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH20Q8N6Y1 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDH20Q8N6Y1 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH20Q8N6Y1 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH20Q8N6Y1 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH20Q8N6Y1 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH20Q8N6Y1 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDH20Q8N6Y1 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.14■□□□□ 0.49
PCDH20Q8N6Y1 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.14■□□□□ 0.49
PCDH20Q8N6Y1 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDH20Q8N6Y1 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH20Q8N6Y1 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDH20Q8N6Y1 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDH20Q8N6Y1 IFNL4P1-201ENST00000607083 540 ntBASIC18.14■□□□□ 0.49
PCDH20Q8N6Y1 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PCDH20Q8N6Y1 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDH20Q8N6Y1 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.14■□□□□ 0.49
PCDH20Q8N6Y1 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH20Q8N6Y1 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH20Q8N6Y1 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH20Q8N6Y1 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH20Q8N6Y1 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH20Q8N6Y1 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDH20Q8N6Y1 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH20Q8N6Y1 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH20Q8N6Y1 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PCDH20Q8N6Y1 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PCDH20Q8N6Y1 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
PCDH20Q8N6Y1 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDH20Q8N6Y1 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
PCDH20Q8N6Y1 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH20Q8N6Y1 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PCDH20Q8N6Y1 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH20Q8N6Y1 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PCDH20Q8N6Y1 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PCDH20Q8N6Y1 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH20Q8N6Y1 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PCDH20Q8N6Y1 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
PCDH20Q8N6Y1 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PCDH20Q8N6Y1 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH20Q8N6Y1 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDH20Q8N6Y1 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH20Q8N6Y1 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDH20Q8N6Y1 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDH20Q8N6Y1 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH20Q8N6Y1 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH20Q8N6Y1 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH20Q8N6Y1 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.13■□□□□ 0.49
PCDH20Q8N6Y1 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PCDH20Q8N6Y1 TPM4P1-201ENST00000436100 807 ntBASIC18.13■□□□□ 0.49
PCDH20Q8N6Y1 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDH20Q8N6Y1 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH20Q8N6Y1 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.13■□□□□ 0.49
PCDH20Q8N6Y1 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.13■□□□□ 0.49
PCDH20Q8N6Y1 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.13■□□□□ 0.49
PCDH20Q8N6Y1 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.13■□□□□ 0.49
PCDH20Q8N6Y1 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH20Q8N6Y1 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDH20Q8N6Y1 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH20Q8N6Y1 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH20Q8N6Y1 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDH20Q8N6Y1 TP73-AS1-210ENST00000637775 1455 ntBASIC18.13■□□□□ 0.49
PCDH20Q8N6Y1 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
PCDH20Q8N6Y1 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH20Q8N6Y1 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH20Q8N6Y1 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH20Q8N6Y1 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PCDH20Q8N6Y1 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH20Q8N6Y1 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH20Q8N6Y1 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH20Q8N6Y1 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH20Q8N6Y1 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PCDH20Q8N6Y1 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PCDH20Q8N6Y1 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH20Q8N6Y1 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH20Q8N6Y1 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH20Q8N6Y1 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH20Q8N6Y1 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDH20Q8N6Y1 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDH20Q8N6Y1 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH20Q8N6Y1 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH20Q8N6Y1 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH20Q8N6Y1 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDH20Q8N6Y1 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.12■□□□□ 0.49
PCDH20Q8N6Y1 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.12■□□□□ 0.49
PCDH20Q8N6Y1 UNC93B7-201ENST00000509439 705 ntBASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms