Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
CCDC50Q8IVM0 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CCDC50Q8IVM0 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC50Q8IVM0 AL355312.1-201ENST00000407115 2176 ntBASIC18.78■□□□□ 0.6
CCDC50Q8IVM0 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC50Q8IVM0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC50Q8IVM0 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC50Q8IVM0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CCDC50Q8IVM0 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC50Q8IVM0 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC50Q8IVM0 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC50Q8IVM0 AL596275.1-201ENST00000423464 877 ntBASIC18.78■□□□□ 0.6
CCDC50Q8IVM0 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC50Q8IVM0 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.78■□□□□ 0.6
CCDC50Q8IVM0 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.78■□□□□ 0.6
CCDC50Q8IVM0 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC50Q8IVM0 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC50Q8IVM0 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC50Q8IVM0 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC50Q8IVM0 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC50Q8IVM0 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC50Q8IVM0 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC50Q8IVM0 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC50Q8IVM0 LINC00602-201ENST00000629776 2065 ntBASIC18.78■□□□□ 0.6
CCDC50Q8IVM0 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
CCDC50Q8IVM0 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC50Q8IVM0 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC50Q8IVM0 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC50Q8IVM0 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CCDC50Q8IVM0 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC50Q8IVM0 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC50Q8IVM0 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC50Q8IVM0 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.6
CCDC50Q8IVM0 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC50Q8IVM0 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC50Q8IVM0 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC50Q8IVM0 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC50Q8IVM0 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC50Q8IVM0 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC50Q8IVM0 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC50Q8IVM0 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC50Q8IVM0 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC50Q8IVM0 PVRIG2P-201ENST00000435460 978 ntBASIC18.77■□□□□ 0.6
CCDC50Q8IVM0 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.77■□□□□ 0.6
CCDC50Q8IVM0 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CCDC50Q8IVM0 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC50Q8IVM0 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC50Q8IVM0 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC50Q8IVM0 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC50Q8IVM0 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC50Q8IVM0 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC50Q8IVM0 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC50Q8IVM0 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC50Q8IVM0 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC50Q8IVM0 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC50Q8IVM0 PP12613-201ENST00000424958 2230 ntBASIC18.77■□□□□ 0.59
CCDC50Q8IVM0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
CCDC50Q8IVM0 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC50Q8IVM0 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC50Q8IVM0 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
CCDC50Q8IVM0 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.77■□□□□ 0.59
CCDC50Q8IVM0 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC50Q8IVM0 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.59
CCDC50Q8IVM0 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC50Q8IVM0 AL356309.3-201ENST00000624132 1934 ntBASIC18.76■□□□□ 0.59
CCDC50Q8IVM0 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC50Q8IVM0 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC50Q8IVM0 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC50Q8IVM0 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC50Q8IVM0 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
CCDC50Q8IVM0 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CCDC50Q8IVM0 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC50Q8IVM0 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC50Q8IVM0 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC50Q8IVM0 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC50Q8IVM0 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CCDC50Q8IVM0 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC50Q8IVM0 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CCDC50Q8IVM0 AC141257.4-201ENST00000634557 245 ntBASIC18.76■□□□□ 0.59
CCDC50Q8IVM0 AC136944.6-201ENST00000634818 245 ntBASIC18.76■□□□□ 0.59
CCDC50Q8IVM0 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CCDC50Q8IVM0 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC50Q8IVM0 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC50Q8IVM0 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC50Q8IVM0 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CCDC50Q8IVM0 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC50Q8IVM0 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC50Q8IVM0 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC50Q8IVM0 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CCDC50Q8IVM0 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC50Q8IVM0 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC50Q8IVM0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CCDC50Q8IVM0 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC50Q8IVM0 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC50Q8IVM0 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC50Q8IVM0 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC50Q8IVM0 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC50Q8IVM0 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC50Q8IVM0 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CCDC50Q8IVM0 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 660.6 ms