Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TRIM50Q86XT4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM50Q86XT4 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.76■□□□□ 0.75
TRIM50Q86XT4 AC009949.1-201ENST00000623048 1830 ntBASIC19.76■□□□□ 0.75
TRIM50Q86XT4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM50Q86XT4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.76■□□□□ 0.75
TRIM50Q86XT4 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.76■□□□□ 0.75
TRIM50Q86XT4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM50Q86XT4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM50Q86XT4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
TRIM50Q86XT4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.76■□□□□ 0.75
TRIM50Q86XT4 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM50Q86XT4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM50Q86XT4 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM50Q86XT4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.76■□□□□ 0.75
TRIM50Q86XT4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM50Q86XT4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
TRIM50Q86XT4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM50Q86XT4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM50Q86XT4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM50Q86XT4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM50Q86XT4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM50Q86XT4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TRIM50Q86XT4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
TRIM50Q86XT4 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.75■□□□□ 0.75
TRIM50Q86XT4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM50Q86XT4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM50Q86XT4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
TRIM50Q86XT4 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.75■□□□□ 0.75
TRIM50Q86XT4 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM50Q86XT4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM50Q86XT4 AC006538.3-201ENST00000612495 578 ntBASIC19.75■□□□□ 0.75
TRIM50Q86XT4 AC073592.5-201ENST00000624854 528 ntBASIC19.75■□□□□ 0.75
TRIM50Q86XT4 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM50Q86XT4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM50Q86XT4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM50Q86XT4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM50Q86XT4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM50Q86XT4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM50Q86XT4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.75■□□□□ 0.75
TRIM50Q86XT4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM50Q86XT4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TRIM50Q86XT4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM50Q86XT4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM50Q86XT4 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
TRIM50Q86XT4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM50Q86XT4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM50Q86XT4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM50Q86XT4 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM50Q86XT4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
TRIM50Q86XT4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
TRIM50Q86XT4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM50Q86XT4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM50Q86XT4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM50Q86XT4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM50Q86XT4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TRIM50Q86XT4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TRIM50Q86XT4 SPDYE21P-201ENST00000413323 827 ntBASIC19.74■□□□□ 0.75
TRIM50Q86XT4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.74■□□□□ 0.75
TRIM50Q86XT4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM50Q86XT4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TRIM50Q86XT4 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.74■□□□□ 0.75
TRIM50Q86XT4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.74■□□□□ 0.75
TRIM50Q86XT4 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM50Q86XT4 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.74■□□□□ 0.75
TRIM50Q86XT4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM50Q86XT4 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.74■□□□□ 0.75
TRIM50Q86XT4 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.74■□□□□ 0.75
TRIM50Q86XT4 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM50Q86XT4 AC073592.4-201ENST00000623827 446 ntBASIC19.74■□□□□ 0.75
TRIM50Q86XT4 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.74■□□□□ 0.75
TRIM50Q86XT4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TRIM50Q86XT4 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM50Q86XT4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM50Q86XT4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM50Q86XT4 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM50Q86XT4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM50Q86XT4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TRIM50Q86XT4 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.73■□□□□ 0.75
TRIM50Q86XT4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM50Q86XT4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
TRIM50Q86XT4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TRIM50Q86XT4 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM50Q86XT4 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.73■□□□□ 0.75
TRIM50Q86XT4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
TRIM50Q86XT4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM50Q86XT4 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM50Q86XT4 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM50Q86XT4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.73■□□□□ 0.75
TRIM50Q86XT4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.73■□□□□ 0.75
TRIM50Q86XT4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.73■□□□□ 0.75
TRIM50Q86XT4 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.73■□□□□ 0.75
TRIM50Q86XT4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.73■□□□□ 0.75
TRIM50Q86XT4 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.73■□□□□ 0.75
TRIM50Q86XT4 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM50Q86XT4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.73■□□□□ 0.75
TRIM50Q86XT4 GPALPP1-207ENST00000611650 899 ntBASIC19.73■□□□□ 0.75
TRIM50Q86XT4 AL022326.1-202ENST00000641533 845 ntBASIC19.73■□□□□ 0.75
TRIM50Q86XT4 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM50Q86XT4 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms