Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTL4Q6ZR62 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTL4Q6ZR62 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RTL4Q6ZR62 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTL4Q6ZR62 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RTL4Q6ZR62 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
RTL4Q6ZR62 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.67■□□□□ 0.26
RTL4Q6ZR62 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTL4Q6ZR62 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
RTL4Q6ZR62 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTL4Q6ZR62 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTL4Q6ZR62 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.67■□□□□ 0.26
RTL4Q6ZR62 LINC00265-3P-201ENST00000447588 903 ntBASIC16.67■□□□□ 0.26
RTL4Q6ZR62 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RTL4Q6ZR62 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.67■□□□□ 0.26
RTL4Q6ZR62 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
RTL4Q6ZR62 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTL4Q6ZR62 AL592071.1-201ENST00000611956 408 ntBASIC16.67■□□□□ 0.26
RTL4Q6ZR62 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RTL4Q6ZR62 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.67■□□□□ 0.26
RTL4Q6ZR62 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTL4Q6ZR62 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RTL4Q6ZR62 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTL4Q6ZR62 GMCL1P1-201ENST00000463439 1581 ntBASIC16.67■□□□□ 0.26
RTL4Q6ZR62 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTL4Q6ZR62 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTL4Q6ZR62 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.67■□□□□ 0.26
RTL4Q6ZR62 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTL4Q6ZR62 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.67■□□□□ 0.26
RTL4Q6ZR62 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RTL4Q6ZR62 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RTL4Q6ZR62 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.67■□□□□ 0.26
RTL4Q6ZR62 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTL4Q6ZR62 AC067852.2-201ENST00000590513 2313 ntBASIC16.67■□□□□ 0.26
RTL4Q6ZR62 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTL4Q6ZR62 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTL4Q6ZR62 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RTL4Q6ZR62 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
RTL4Q6ZR62 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTL4Q6ZR62 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTL4Q6ZR62 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTL4Q6ZR62 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.66■□□□□ 0.26
RTL4Q6ZR62 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTL4Q6ZR62 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTL4Q6ZR62 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTL4Q6ZR62 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RTL4Q6ZR62 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.66■□□□□ 0.26
RTL4Q6ZR62 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.66■□□□□ 0.26
RTL4Q6ZR62 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.66■□□□□ 0.26
RTL4Q6ZR62 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RTL4Q6ZR62 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RTL4Q6ZR62 VENTXP7-201ENST00000475503 772 ntBASIC16.66■□□□□ 0.26
RTL4Q6ZR62 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.66■□□□□ 0.26
RTL4Q6ZR62 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.66■□□□□ 0.26
RTL4Q6ZR62 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTL4Q6ZR62 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RTL4Q6ZR62 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTL4Q6ZR62 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.66■□□□□ 0.26
RTL4Q6ZR62 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.66■□□□□ 0.26
RTL4Q6ZR62 AC124864.1-201ENST00000623408 392 ntBASIC16.66■□□□□ 0.26
RTL4Q6ZR62 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.66■□□□□ 0.26
RTL4Q6ZR62 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RTL4Q6ZR62 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
RTL4Q6ZR62 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RTL4Q6ZR62 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTL4Q6ZR62 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTL4Q6ZR62 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTL4Q6ZR62 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTL4Q6ZR62 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTL4Q6ZR62 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RTL4Q6ZR62 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTL4Q6ZR62 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.65■□□□□ 0.26
RTL4Q6ZR62 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.65■□□□□ 0.26
RTL4Q6ZR62 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RTL4Q6ZR62 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.65■□□□□ 0.26
RTL4Q6ZR62 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RTL4Q6ZR62 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTL4Q6ZR62 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
RTL4Q6ZR62 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTL4Q6ZR62 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTL4Q6ZR62 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RTL4Q6ZR62 AC139713.2-201ENST00000641328 2723 ntBASIC16.65■□□□□ 0.26
RTL4Q6ZR62 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RTL4Q6ZR62 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RTL4Q6ZR62 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTL4Q6ZR62 CROCCP1-201ENST00000426910 5675 ntBASIC16.65■□□□□ 0.26
RTL4Q6ZR62 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTL4Q6ZR62 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTL4Q6ZR62 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTL4Q6ZR62 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.65■□□□□ 0.26
RTL4Q6ZR62 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.65■□□□□ 0.26
RTL4Q6ZR62 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RTL4Q6ZR62 TSPY12P-201ENST00000421279 868 ntBASIC16.65■□□□□ 0.26
RTL4Q6ZR62 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.65■□□□□ 0.26
RTL4Q6ZR62 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.65■□□□□ 0.26
RTL4Q6ZR62 TOB2P1-201ENST00000469761 992 ntBASIC16.65■□□□□ 0.26
RTL4Q6ZR62 AP000867.3-201ENST00000524675 377 ntBASIC16.65■□□□□ 0.26
RTL4Q6ZR62 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.65■□□□□ 0.26
RTL4Q6ZR62 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.65■□□□□ 0.26
RTL4Q6ZR62 PRELID1P1-202ENST00000567272 903 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms