Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CTR9Q6PD62 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTR9Q6PD62 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTR9Q6PD62 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CTR9Q6PD62 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CTR9Q6PD62 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTR9Q6PD62 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CTR9Q6PD62 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CTR9Q6PD62 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CTR9Q6PD62 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTR9Q6PD62 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTR9Q6PD62 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC21.06■□□□□ 0.96
CTR9Q6PD62 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC21.06■□□□□ 0.96
CTR9Q6PD62 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC21.06■□□□□ 0.96
CTR9Q6PD62 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CTR9Q6PD62 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CTR9Q6PD62 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CTR9Q6PD62 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTR9Q6PD62 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC21.06■□□□□ 0.96
CTR9Q6PD62 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
CTR9Q6PD62 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CTR9Q6PD62 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CTR9Q6PD62 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CTR9Q6PD62 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
CTR9Q6PD62 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC21.06■□□□□ 0.96
CTR9Q6PD62 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC21.06■□□□□ 0.96
CTR9Q6PD62 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CTR9Q6PD62 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
CTR9Q6PD62 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.06■□□□□ 0.96
CTR9Q6PD62 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CTR9Q6PD62 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC21.06■□□□□ 0.96
CTR9Q6PD62 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CTR9Q6PD62 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTR9Q6PD62 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC21.06■□□□□ 0.96
CTR9Q6PD62 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC21.06■□□□□ 0.96
CTR9Q6PD62 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC21.06■□□□□ 0.96
CTR9Q6PD62 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC21.06■□□□□ 0.96
CTR9Q6PD62 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTR9Q6PD62 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTR9Q6PD62 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.06■□□□□ 0.96
CTR9Q6PD62 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CTR9Q6PD62 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTR9Q6PD62 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTR9Q6PD62 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CTR9Q6PD62 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTR9Q6PD62 SIRPAP1-201ENST00000448467 1770 ntBASIC21.05■□□□□ 0.96
CTR9Q6PD62 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTR9Q6PD62 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC21.05■□□□□ 0.96
CTR9Q6PD62 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC21.05■□□□□ 0.96
CTR9Q6PD62 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CTR9Q6PD62 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC21.05■□□□□ 0.96
CTR9Q6PD62 NEFHP1-201ENST00000412845 2629 ntBASIC21.05■□□□□ 0.96
CTR9Q6PD62 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTR9Q6PD62 SOD2-201ENST00000337404 991 ntTSL 2 BASIC21.05■□□□□ 0.96
CTR9Q6PD62 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CTR9Q6PD62 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CTR9Q6PD62 FAM197Y8-203ENST00000450145 560 ntBASIC21.05■□□□□ 0.96
CTR9Q6PD62 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC21.05■□□□□ 0.96
CTR9Q6PD62 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC21.05■□□□□ 0.96
CTR9Q6PD62 AD001527.2-201ENST00000622994 785 ntBASIC21.05■□□□□ 0.96
CTR9Q6PD62 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CTR9Q6PD62 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CTR9Q6PD62 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTR9Q6PD62 PAN3-AS1-201ENST00000563843 1351 ntBASIC21.05■□□□□ 0.96
CTR9Q6PD62 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CTR9Q6PD62 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CTR9Q6PD62 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC21.05■□□□□ 0.96
CTR9Q6PD62 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTR9Q6PD62 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC21.05■□□□□ 0.96
CTR9Q6PD62 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
CTR9Q6PD62 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
CTR9Q6PD62 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CTR9Q6PD62 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CTR9Q6PD62 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTR9Q6PD62 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CTR9Q6PD62 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CTR9Q6PD62 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC21.04■□□□□ 0.96
CTR9Q6PD62 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTR9Q6PD62 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTR9Q6PD62 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC21.04■□□□□ 0.96
CTR9Q6PD62 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CTR9Q6PD62 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC21.04■□□□□ 0.96
CTR9Q6PD62 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
CTR9Q6PD62 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CTR9Q6PD62 AC116407.2-201ENST00000613639 860 ntBASIC21.04■□□□□ 0.96
CTR9Q6PD62 AC148477.8-201ENST00000624298 468 ntBASIC21.04■□□□□ 0.96
CTR9Q6PD62 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CTR9Q6PD62 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC21.04■□□□□ 0.96
CTR9Q6PD62 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.04■□□□□ 0.96
CTR9Q6PD62 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC21.04■□□□□ 0.96
CTR9Q6PD62 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTR9Q6PD62 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTR9Q6PD62 CD276-201ENST00000318424 2738 ntTSL 5 BASIC21.04■□□□□ 0.96
CTR9Q6PD62 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC21.04■□□□□ 0.96
CTR9Q6PD62 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTR9Q6PD62 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CTR9Q6PD62 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.03■□□□□ 0.96
CTR9Q6PD62 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTR9Q6PD62 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CTR9Q6PD62 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms