Protein–RNA interactions for Protein: Q6P3S1

DENND1B, DENN domain-containing protein 1B, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1BQ6P3S1 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
DENND1BQ6P3S1 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
DENND1BQ6P3S1 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.79■□□□□ 0.6
DENND1BQ6P3S1 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.79■□□□□ 0.6
DENND1BQ6P3S1 VENTXP7-201ENST00000475503 772 ntBASIC18.79■□□□□ 0.6
DENND1BQ6P3S1 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.79■□□□□ 0.6
DENND1BQ6P3S1 AP000867.3-201ENST00000524675 377 ntBASIC18.79■□□□□ 0.6
DENND1BQ6P3S1 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DENND1BQ6P3S1 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.79■□□□□ 0.6
DENND1BQ6P3S1 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.79■□□□□ 0.6
DENND1BQ6P3S1 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.79■□□□□ 0.6
DENND1BQ6P3S1 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.79■□□□□ 0.6
DENND1BQ6P3S1 AC092329.2-201ENST00000598402 547 ntBASIC18.79■□□□□ 0.6
DENND1BQ6P3S1 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.79■□□□□ 0.6
DENND1BQ6P3S1 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.79■□□□□ 0.6
DENND1BQ6P3S1 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.79■□□□□ 0.6
DENND1BQ6P3S1 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DENND1BQ6P3S1 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DENND1BQ6P3S1 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DENND1BQ6P3S1 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
DENND1BQ6P3S1 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.79■□□□□ 0.6
DENND1BQ6P3S1 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.79■□□□□ 0.6
DENND1BQ6P3S1 LINC00304-203ENST00000565008 1864 ntBASIC18.79■□□□□ 0.6
DENND1BQ6P3S1 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DENND1BQ6P3S1 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
DENND1BQ6P3S1 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DENND1BQ6P3S1 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DENND1BQ6P3S1 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
DENND1BQ6P3S1 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
DENND1BQ6P3S1 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
DENND1BQ6P3S1 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
DENND1BQ6P3S1 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DENND1BQ6P3S1 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
DENND1BQ6P3S1 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DENND1BQ6P3S1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DENND1BQ6P3S1 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.78■□□□□ 0.6
DENND1BQ6P3S1 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DENND1BQ6P3S1 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.78■□□□□ 0.6
DENND1BQ6P3S1 KRT17P6-201ENST00000453795 1220 ntBASIC18.78■□□□□ 0.6
DENND1BQ6P3S1 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.78■□□□□ 0.6
DENND1BQ6P3S1 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DENND1BQ6P3S1 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DENND1BQ6P3S1 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.78■□□□□ 0.6
DENND1BQ6P3S1 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.78■□□□□ 0.6
DENND1BQ6P3S1 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
DENND1BQ6P3S1 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DENND1BQ6P3S1 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DENND1BQ6P3S1 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.78■□□□□ 0.6
DENND1BQ6P3S1 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DENND1BQ6P3S1 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DENND1BQ6P3S1 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DENND1BQ6P3S1 AC026471.1-201ENST00000564629 3026 ntBASIC18.78■□□□□ 0.6
DENND1BQ6P3S1 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.78■□□□□ 0.6
DENND1BQ6P3S1 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DENND1BQ6P3S1 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
DENND1BQ6P3S1 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
DENND1BQ6P3S1 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
DENND1BQ6P3S1 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.77■□□□□ 0.6
DENND1BQ6P3S1 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DENND1BQ6P3S1 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DENND1BQ6P3S1 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DENND1BQ6P3S1 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DENND1BQ6P3S1 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
DENND1BQ6P3S1 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DENND1BQ6P3S1 IGHV3-47-201ENST00000425060 335 ntBASIC18.77■□□□□ 0.6
DENND1BQ6P3S1 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.77■□□□□ 0.6
DENND1BQ6P3S1 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.77■□□□□ 0.6
DENND1BQ6P3S1 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.77■□□□□ 0.6
DENND1BQ6P3S1 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
DENND1BQ6P3S1 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.77■□□□□ 0.6
DENND1BQ6P3S1 AC074051.2-201ENST00000565115 352 ntBASIC18.77■□□□□ 0.6
DENND1BQ6P3S1 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.77■□□□□ 0.6
DENND1BQ6P3S1 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DENND1BQ6P3S1 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.77■□□□□ 0.6
DENND1BQ6P3S1 Z69720.1-201ENST00000601483 472 ntBASIC18.77■□□□□ 0.6
DENND1BQ6P3S1 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
DENND1BQ6P3S1 NSUN5P1-202ENST00000421140 1535 ntBASIC18.77■□□□□ 0.6
DENND1BQ6P3S1 NSUN5P2-203ENST00000457352 1529 ntBASIC18.77■□□□□ 0.6
DENND1BQ6P3S1 BX276092.7-203ENST00000637198 1536 ntBASIC18.77■□□□□ 0.6
DENND1BQ6P3S1 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
DENND1BQ6P3S1 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DENND1BQ6P3S1 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
DENND1BQ6P3S1 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
DENND1BQ6P3S1 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
DENND1BQ6P3S1 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
DENND1BQ6P3S1 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
DENND1BQ6P3S1 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.76■□□□□ 0.59
DENND1BQ6P3S1 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
DENND1BQ6P3S1 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
DENND1BQ6P3S1 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
DENND1BQ6P3S1 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
DENND1BQ6P3S1 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DENND1BQ6P3S1 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.76■□□□□ 0.59
DENND1BQ6P3S1 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.76■□□□□ 0.59
DENND1BQ6P3S1 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
DENND1BQ6P3S1 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DENND1BQ6P3S1 COX5BP2-201ENST00000392354 334 ntBASIC18.76■□□□□ 0.59
DENND1BQ6P3S1 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DENND1BQ6P3S1 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DENND1BQ6P3S1 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms