Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.75■□□□□ 0.75
SWSAP1Q6NVH7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.75■□□□□ 0.75
SWSAP1Q6NVH7 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.75■□□□□ 0.75
SWSAP1Q6NVH7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
SWSAP1Q6NVH7 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SWSAP1Q6NVH7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SWSAP1Q6NVH7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.75■□□□□ 0.75
SWSAP1Q6NVH7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SWSAP1Q6NVH7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SWSAP1Q6NVH7 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SWSAP1Q6NVH7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
SWSAP1Q6NVH7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
SWSAP1Q6NVH7 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SWSAP1Q6NVH7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SWSAP1Q6NVH7 AL354751.1-201ENST00000412768 1863 ntBASIC19.74■□□□□ 0.75
SWSAP1Q6NVH7 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.74■□□□□ 0.75
SWSAP1Q6NVH7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SWSAP1Q6NVH7 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.74■□□□□ 0.75
SWSAP1Q6NVH7 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.74■□□□□ 0.75
SWSAP1Q6NVH7 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
SWSAP1Q6NVH7 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SWSAP1Q6NVH7 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.74■□□□□ 0.75
SWSAP1Q6NVH7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SWSAP1Q6NVH7 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SWSAP1Q6NVH7 AL049840.3-201ENST00000602669 611 ntBASIC19.74■□□□□ 0.75
SWSAP1Q6NVH7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SWSAP1Q6NVH7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.74■□□□□ 0.75
SWSAP1Q6NVH7 AL139288.1-201ENST00000623748 933 ntBASIC19.74■□□□□ 0.75
SWSAP1Q6NVH7 AC073592.5-201ENST00000624854 528 ntBASIC19.74■□□□□ 0.75
SWSAP1Q6NVH7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SWSAP1Q6NVH7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.74■□□□□ 0.75
SWSAP1Q6NVH7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.74■□□□□ 0.75
SWSAP1Q6NVH7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SWSAP1Q6NVH7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
SWSAP1Q6NVH7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SWSAP1Q6NVH7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SWSAP1Q6NVH7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SWSAP1Q6NVH7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.74■□□□□ 0.75
SWSAP1Q6NVH7 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SWSAP1Q6NVH7 AC004817.3-201ENST00000602957 2129 ntBASIC19.73■□□□□ 0.75
SWSAP1Q6NVH7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SWSAP1Q6NVH7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SWSAP1Q6NVH7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SWSAP1Q6NVH7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
SWSAP1Q6NVH7 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.73■□□□□ 0.75
SWSAP1Q6NVH7 AC079776.2-201ENST00000641154 1609 ntBASIC19.73■□□□□ 0.75
SWSAP1Q6NVH7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
SWSAP1Q6NVH7 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SWSAP1Q6NVH7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SWSAP1Q6NVH7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.73■□□□□ 0.75
SWSAP1Q6NVH7 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
SWSAP1Q6NVH7 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SWSAP1Q6NVH7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.73■□□□□ 0.75
SWSAP1Q6NVH7 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SWSAP1Q6NVH7 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.73■□□□□ 0.75
SWSAP1Q6NVH7 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SWSAP1Q6NVH7 RPS2P1-201ENST00000434010 821 ntBASIC19.73■□□□□ 0.75
SWSAP1Q6NVH7 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.73■□□□□ 0.75
SWSAP1Q6NVH7 BX005266.1-201ENST00000473402 457 ntBASIC19.73■□□□□ 0.75
SWSAP1Q6NVH7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.73■□□□□ 0.75
SWSAP1Q6NVH7 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SWSAP1Q6NVH7 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SWSAP1Q6NVH7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SWSAP1Q6NVH7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SWSAP1Q6NVH7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SWSAP1Q6NVH7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SWSAP1Q6NVH7 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SWSAP1Q6NVH7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SWSAP1Q6NVH7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SWSAP1Q6NVH7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
SWSAP1Q6NVH7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SWSAP1Q6NVH7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SWSAP1Q6NVH7 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SWSAP1Q6NVH7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SWSAP1Q6NVH7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SWSAP1Q6NVH7 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SWSAP1Q6NVH7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 AL590627.1-203ENST00000421194 1026 ntBASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.72■□□□□ 0.75
SWSAP1Q6NVH7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms