Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC14□□□□□ -0.17
CCL20P78556 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC14□□□□□ -0.17
CCL20P78556 DUTP2-201ENST00000519164 463 ntBASIC14□□□□□ -0.17
CCL20P78556 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC14□□□□□ -0.17
CCL20P78556 AC133552.2-202ENST00000575694 574 ntBASIC14□□□□□ -0.17
CCL20P78556 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC14□□□□□ -0.17
CCL20P78556 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCL20P78556 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL20P78556 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CCL20P78556 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CCL20P78556 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL20P78556 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCL20P78556 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14□□□□□ -0.17
CCL20P78556 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CCL20P78556 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
CCL20P78556 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL20P78556 LYSMD4-203ENST00000378904 2122 ntBASIC14□□□□□ -0.17
CCL20P78556 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
CCL20P78556 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL20P78556 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL20P78556 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CCL20P78556 AC034236.2-201ENST00000606662 1610 ntBASIC14□□□□□ -0.17
CCL20P78556 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCL20P78556 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL20P78556 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCL20P78556 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
CCL20P78556 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC13.99□□□□□ -0.17
CCL20P78556 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC13.99□□□□□ -0.17
CCL20P78556 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCL20P78556 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CCL20P78556 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.99□□□□□ -0.17
CCL20P78556 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.99□□□□□ -0.17
CCL20P78556 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CCL20P78556 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC13.99□□□□□ -0.17
CCL20P78556 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.99□□□□□ -0.17
CCL20P78556 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL20P78556 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC13.99□□□□□ -0.17
CCL20P78556 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCL20P78556 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL20P78556 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC13.99□□□□□ -0.17
CCL20P78556 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL20P78556 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC13.99□□□□□ -0.17
CCL20P78556 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.99□□□□□ -0.17
CCL20P78556 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL20P78556 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CCL20P78556 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL20P78556 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC13.99□□□□□ -0.17
CCL20P78556 DUSP5P2-201ENST00000426873 1033 ntBASIC13.99□□□□□ -0.17
CCL20P78556 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC13.99□□□□□ -0.17
CCL20P78556 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCL20P78556 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCL20P78556 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC13.99□□□□□ -0.17
CCL20P78556 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCL20P78556 Six3os1_6.1-201ENST00000620790 196 ntBASIC13.99□□□□□ -0.17
CCL20P78556 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC13.99□□□□□ -0.17
CCL20P78556 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCL20P78556 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC13.99□□□□□ -0.17
CCL20P78556 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL20P78556 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL20P78556 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL20P78556 RHBDF1P1-201ENST00000427504 1941 ntBASIC13.99□□□□□ -0.17
CCL20P78556 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.99□□□□□ -0.17
CCL20P78556 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC13.99□□□□□ -0.17
CCL20P78556 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CCL20P78556 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL20P78556 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CCL20P78556 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL20P78556 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCL20P78556 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL20P78556 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL20P78556 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL20P78556 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL20P78556 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC13.99□□□□□ -0.17
CCL20P78556 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL20P78556 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
CCL20P78556 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL20P78556 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CCL20P78556 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC13.98□□□□□ -0.17
CCL20P78556 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL20P78556 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.98□□□□□ -0.17
CCL20P78556 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL20P78556 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CCL20P78556 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC13.98□□□□□ -0.17
CCL20P78556 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL20P78556 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL20P78556 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC13.98□□□□□ -0.17
CCL20P78556 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL20P78556 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.98□□□□□ -0.17
CCL20P78556 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL20P78556 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL20P78556 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCL20P78556 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL20P78556 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CCL20P78556 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL20P78556 ELP6-205ENST00000439305 880 ntTSL 2 BASIC13.98□□□□□ -0.17
CCL20P78556 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC13.98□□□□□ -0.17
CCL20P78556 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC13.98□□□□□ -0.17
CCL20P78556 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC13.98□□□□□ -0.17
CCL20P78556 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC13.98□□□□□ -0.17
CCL20P78556 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms