Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.7■□□□□ 0.26
RAB38P57729 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.7■□□□□ 0.26
RAB38P57729 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.7■□□□□ 0.26
RAB38P57729 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RAB38P57729 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.7■□□□□ 0.26
RAB38P57729 INTS4P1-201ENST00000438455 1935 ntBASIC16.7■□□□□ 0.26
RAB38P57729 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
RAB38P57729 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RAB38P57729 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB38P57729 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB38P57729 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.69■□□□□ 0.26
RAB38P57729 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB38P57729 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB38P57729 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB38P57729 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB38P57729 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.69■□□□□ 0.26
RAB38P57729 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.69■□□□□ 0.26
RAB38P57729 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.69■□□□□ 0.26
RAB38P57729 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.69■□□□□ 0.26
RAB38P57729 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.69■□□□□ 0.26
RAB38P57729 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.69■□□□□ 0.26
RAB38P57729 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.69■□□□□ 0.26
RAB38P57729 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.69■□□□□ 0.26
RAB38P57729 AL121772.3-201ENST00000610840 674 ntBASIC16.69■□□□□ 0.26
RAB38P57729 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.69■□□□□ 0.26
RAB38P57729 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB38P57729 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB38P57729 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB38P57729 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
RAB38P57729 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RAB38P57729 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB38P57729 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
RAB38P57729 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB38P57729 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.69■□□□□ 0.26
RAB38P57729 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RAB38P57729 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.69■□□□□ 0.26
RAB38P57729 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.69■□□□□ 0.26
RAB38P57729 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RAB38P57729 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB38P57729 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.69■□□□□ 0.26
RAB38P57729 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.69■□□□□ 0.26
RAB38P57729 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB38P57729 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
RAB38P57729 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB38P57729 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB38P57729 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.68■□□□□ 0.26
RAB38P57729 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB38P57729 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB38P57729 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RAB38P57729 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB38P57729 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
RAB38P57729 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB38P57729 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.68■□□□□ 0.26
RAB38P57729 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB38P57729 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.68■□□□□ 0.26
RAB38P57729 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.68■□□□□ 0.26
RAB38P57729 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.68■□□□□ 0.26
RAB38P57729 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.68■□□□□ 0.26
RAB38P57729 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.68■□□□□ 0.26
RAB38P57729 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB38P57729 KRT16P4-201ENST00000453883 522 ntBASIC16.68■□□□□ 0.26
RAB38P57729 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.68■□□□□ 0.26
RAB38P57729 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.68■□□□□ 0.26
RAB38P57729 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB38P57729 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.68■□□□□ 0.26
RAB38P57729 AC012313.10-201ENST00000623509 926 ntBASIC16.68■□□□□ 0.26
RAB38P57729 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.68■□□□□ 0.26
RAB38P57729 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.68■□□□□ 0.26
RAB38P57729 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB38P57729 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB38P57729 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB38P57729 AC134043.2-201ENST00000624206 2238 ntBASIC16.68■□□□□ 0.26
RAB38P57729 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RAB38P57729 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB38P57729 AC068880.1-201ENST00000507289 2297 ntBASIC16.67■□□□□ 0.26
RAB38P57729 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB38P57729 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB38P57729 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB38P57729 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RAB38P57729 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.67■□□□□ 0.26
RAB38P57729 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
RAB38P57729 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB38P57729 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB38P57729 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB38P57729 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
RAB38P57729 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RAB38P57729 AC103564.2-201ENST00000432853 1299 ntBASIC16.67■□□□□ 0.26
RAB38P57729 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB38P57729 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.67■□□□□ 0.26
RAB38P57729 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.67■□□□□ 0.26
RAB38P57729 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.67■□□□□ 0.26
RAB38P57729 MIR5100-201ENST00000579544 119 ntBASIC16.67■□□□□ 0.26
RAB38P57729 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.67■□□□□ 0.26
RAB38P57729 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.67■□□□□ 0.26
RAB38P57729 LINC01451-201ENST00000623792 534 ntBASIC16.67■□□□□ 0.26
RAB38P57729 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB38P57729 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB38P57729 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.67■□□□□ 0.26
RAB38P57729 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB38P57729 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms