Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.56■□□□□ 0.72
PEX3P56589 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PEX3P56589 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PEX3P56589 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PEX3P56589 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PEX3P56589 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PEX3P56589 COX5BP2-201ENST00000392354 334 ntBASIC19.56■□□□□ 0.72
PEX3P56589 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PEX3P56589 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
PEX3P56589 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.56■□□□□ 0.72
PEX3P56589 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.56■□□□□ 0.72
PEX3P56589 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PEX3P56589 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.56■□□□□ 0.72
PEX3P56589 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.56■□□□□ 0.72
PEX3P56589 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PEX3P56589 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PEX3P56589 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
PEX3P56589 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PEX3P56589 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PEX3P56589 AC006116.8-202ENST00000587620 1550 ntBASIC19.56■□□□□ 0.72
PEX3P56589 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.56■□□□□ 0.72
PEX3P56589 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
PEX3P56589 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PEX3P56589 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PEX3P56589 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PEX3P56589 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PEX3P56589 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PEX3P56589 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PEX3P56589 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PEX3P56589 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PEX3P56589 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.55■□□□□ 0.72
PEX3P56589 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PEX3P56589 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.55■□□□□ 0.72
PEX3P56589 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PEX3P56589 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.55■□□□□ 0.72
PEX3P56589 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PEX3P56589 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PEX3P56589 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.55■□□□□ 0.72
PEX3P56589 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.55■□□□□ 0.72
PEX3P56589 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.55■□□□□ 0.72
PEX3P56589 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.55■□□□□ 0.72
PEX3P56589 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.55■□□□□ 0.72
PEX3P56589 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.55■□□□□ 0.72
PEX3P56589 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PEX3P56589 IFNL4P1-201ENST00000607083 540 ntBASIC19.55■□□□□ 0.72
PEX3P56589 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.55■□□□□ 0.72
PEX3P56589 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PEX3P56589 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.55■□□□□ 0.72
PEX3P56589 BX276092.7-203ENST00000637198 1536 ntBASIC19.55■□□□□ 0.72
PEX3P56589 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PEX3P56589 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PEX3P56589 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.55■□□□□ 0.72
PEX3P56589 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PEX3P56589 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PEX3P56589 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PEX3P56589 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PEX3P56589 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PEX3P56589 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PEX3P56589 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.54■□□□□ 0.72
PEX3P56589 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PEX3P56589 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PEX3P56589 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PEX3P56589 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PEX3P56589 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PEX3P56589 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PEX3P56589 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PEX3P56589 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PEX3P56589 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PEX3P56589 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.54■□□□□ 0.72
PEX3P56589 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.54■□□□□ 0.72
PEX3P56589 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PEX3P56589 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PEX3P56589 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PEX3P56589 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.54■□□□□ 0.72
PEX3P56589 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.54■□□□□ 0.72
PEX3P56589 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.54■□□□□ 0.72
PEX3P56589 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.54■□□□□ 0.72
PEX3P56589 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.54■□□□□ 0.72
PEX3P56589 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.54■□□□□ 0.72
PEX3P56589 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PEX3P56589 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.54■□□□□ 0.72
PEX3P56589 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.54■□□□□ 0.72
PEX3P56589 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.54■□□□□ 0.72
PEX3P56589 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PEX3P56589 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PEX3P56589 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PEX3P56589 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.54■□□□□ 0.72
PEX3P56589 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PEX3P56589 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PEX3P56589 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PEX3P56589 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.54■□□□□ 0.72
PEX3P56589 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.54■□□□□ 0.72
PEX3P56589 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
PEX3P56589 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PEX3P56589 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PEX3P56589 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PEX3P56589 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PEX3P56589 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PEX3P56589 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.53■□□□□ 0.72
PEX3P56589 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms