Protein–RNA interactions for Protein: P55789

GFER, FAD-linked sulfhydryl oxidase ALR, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFERP55789 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.94■□□□□ 0.3
GFERP55789 AC019129.2-201ENST00000609837 1235 ntBASIC16.94■□□□□ 0.3
GFERP55789 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.94■□□□□ 0.3
GFERP55789 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GFERP55789 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
GFERP55789 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GFERP55789 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GFERP55789 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
GFERP55789 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.94■□□□□ 0.3
GFERP55789 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GFERP55789 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GFERP55789 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GFERP55789 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GFERP55789 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.93■□□□□ 0.3
GFERP55789 AC148477.5-201ENST00000625164 1645 ntBASIC16.93■□□□□ 0.3
GFERP55789 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GFERP55789 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
GFERP55789 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GFERP55789 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
GFERP55789 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.93■□□□□ 0.3
GFERP55789 LAGE3P1-201ENST00000425356 484 ntBASIC16.93■□□□□ 0.3
GFERP55789 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.93■□□□□ 0.3
GFERP55789 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.93■□□□□ 0.3
GFERP55789 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GFERP55789 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
GFERP55789 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.93■□□□□ 0.3
GFERP55789 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GFERP55789 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GFERP55789 SIGLEC16-201ENST00000599858 1437 ntBASIC16.93■□□□□ 0.3
GFERP55789 AC104109.2-201ENST00000602919 1418 ntBASIC16.93■□□□□ 0.3
GFERP55789 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
GFERP55789 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.93■□□□□ 0.3
GFERP55789 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.93■□□□□ 0.3
GFERP55789 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GFERP55789 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
GFERP55789 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.93■□□□□ 0.3
GFERP55789 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GFERP55789 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GFERP55789 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
GFERP55789 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.92■□□□□ 0.3
GFERP55789 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.92■□□□□ 0.3
GFERP55789 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GFERP55789 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GFERP55789 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
GFERP55789 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.92■□□□□ 0.3
GFERP55789 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.92■□□□□ 0.3
GFERP55789 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.92■□□□□ 0.3
GFERP55789 MIR940-201ENST00000401276 94 ntBASIC16.92■□□□□ 0.3
GFERP55789 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.92■□□□□ 0.3
GFERP55789 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
GFERP55789 KRT18P58-201ENST00000527480 1120 ntBASIC16.92■□□□□ 0.3
GFERP55789 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GFERP55789 AC105339.3-201ENST00000560043 636 ntBASIC16.92■□□□□ 0.3
GFERP55789 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.92■□□□□ 0.3
GFERP55789 AC109462.3-201ENST00000573934 613 ntBASIC16.92■□□□□ 0.3
GFERP55789 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.92■□□□□ 0.3
GFERP55789 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.92■□□□□ 0.3
GFERP55789 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
GFERP55789 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.92■□□□□ 0.3
GFERP55789 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GFERP55789 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
GFERP55789 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.92■□□□□ 0.3
GFERP55789 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GFERP55789 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
GFERP55789 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GFERP55789 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.92■□□□□ 0.3
GFERP55789 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GFERP55789 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
GFERP55789 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GFERP55789 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
GFERP55789 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GFERP55789 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GFERP55789 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.91■□□□□ 0.3
GFERP55789 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GFERP55789 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.91■□□□□ 0.3
GFERP55789 BX276092.7-203ENST00000637198 1536 ntBASIC16.91■□□□□ 0.3
GFERP55789 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GFERP55789 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GFERP55789 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GFERP55789 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.91■□□□□ 0.3
GFERP55789 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.91■□□□□ 0.3
GFERP55789 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GFERP55789 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GFERP55789 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.91■□□□□ 0.3
GFERP55789 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GFERP55789 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.91■□□□□ 0.3
GFERP55789 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GFERP55789 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GFERP55789 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.91■□□□□ 0.3
GFERP55789 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.91■□□□□ 0.3
GFERP55789 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.91■□□□□ 0.3
GFERP55789 AL020989.1-201ENST00000422979 469 ntBASIC16.91■□□□□ 0.3
GFERP55789 DDX43P3-201ENST00000441064 443 ntBASIC16.91■□□□□ 0.3
GFERP55789 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.91■□□□□ 0.3
GFERP55789 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GFERP55789 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
GFERP55789 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
GFERP55789 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.91■□□□□ 0.3
GFERP55789 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GFERP55789 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms