Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.14■□□□□ 0.49
CDH4P55283 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.14■□□□□ 0.49
CDH4P55283 AP001269.4-201ENST00000609611 512 ntBASIC18.14■□□□□ 0.49
CDH4P55283 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CDH4P55283 AD001527.2-201ENST00000622994 785 ntBASIC18.14■□□□□ 0.49
CDH4P55283 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.14■□□□□ 0.49
CDH4P55283 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH4P55283 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CDH4P55283 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.14■□□□□ 0.49
CDH4P55283 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH4P55283 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CDH4P55283 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH4P55283 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH4P55283 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.14■□□□□ 0.49
CDH4P55283 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CDH4P55283 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CDH4P55283 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.13■□□□□ 0.49
CDH4P55283 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH4P55283 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.13■□□□□ 0.49
CDH4P55283 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.13■□□□□ 0.49
CDH4P55283 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.13■□□□□ 0.49
CDH4P55283 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
CDH4P55283 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.13■□□□□ 0.49
CDH4P55283 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.13■□□□□ 0.49
CDH4P55283 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDH4P55283 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CDH4P55283 SIRPAP1-201ENST00000448467 1770 ntBASIC18.13■□□□□ 0.49
CDH4P55283 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.13■□□□□ 0.49
CDH4P55283 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH4P55283 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.13■□□□□ 0.49
CDH4P55283 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.13■□□□□ 0.49
CDH4P55283 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.13■□□□□ 0.49
CDH4P55283 AF238378.1-201ENST00000526806 358 ntBASIC18.13■□□□□ 0.49
CDH4P55283 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.13■□□□□ 0.49
CDH4P55283 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CDH4P55283 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.13■□□□□ 0.49
CDH4P55283 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.13■□□□□ 0.49
CDH4P55283 AL121894.2-201ENST00000602977 491 ntBASIC18.13■□□□□ 0.49
CDH4P55283 AP000867.4-201ENST00000641616 219 ntBASIC18.13■□□□□ 0.49
CDH4P55283 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH4P55283 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDH4P55283 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
CDH4P55283 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.13■□□□□ 0.49
CDH4P55283 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CDH4P55283 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.13■□□□□ 0.49
CDH4P55283 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDH4P55283 AP005117.1-201ENST00000584346 1413 ntBASIC18.13■□□□□ 0.49
CDH4P55283 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.13■□□□□ 0.49
CDH4P55283 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH4P55283 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CDH4P55283 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDH4P55283 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH4P55283 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH4P55283 AC006116.8-202ENST00000587620 1550 ntBASIC18.13■□□□□ 0.49
CDH4P55283 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDH4P55283 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDH4P55283 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH4P55283 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH4P55283 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CDH4P55283 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH4P55283 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH4P55283 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.12■□□□□ 0.49
CDH4P55283 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH4P55283 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH4P55283 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH4P55283 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.12■□□□□ 0.49
CDH4P55283 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDH4P55283 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CDH4P55283 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDH4P55283 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CDH4P55283 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDH4P55283 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.12■□□□□ 0.49
CDH4P55283 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDH4P55283 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.12■□□□□ 0.49
CDH4P55283 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.12■□□□□ 0.49
CDH4P55283 AC008608.2-201ENST00000606089 416 ntBASIC18.12■□□□□ 0.49
CDH4P55283 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDH4P55283 AL355877.3-201ENST00000622820 899 ntBASIC18.12■□□□□ 0.49
CDH4P55283 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CDH4P55283 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH4P55283 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.12■□□□□ 0.49
CDH4P55283 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDH4P55283 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH4P55283 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH4P55283 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDH4P55283 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.12■□□□□ 0.49
CDH4P55283 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDH4P55283 AL049757.1-201ENST00000616842 1596 ntBASIC18.12■□□□□ 0.49
CDH4P55283 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDH4P55283 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CDH4P55283 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.12■□□□□ 0.49
CDH4P55283 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.12■□□□□ 0.49
CDH4P55283 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH4P55283 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.12■□□□□ 0.49
CDH4P55283 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDH4P55283 AC008764.6-201ENST00000595909 2069 ntBASIC18.11■□□□□ 0.49
CDH4P55283 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CDH4P55283 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.11■□□□□ 0.49
CDH4P55283 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CDH4P55283 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms