Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLCNKAP51800 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLCNKAP51800 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLCNKAP51800 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCNKAP51800 AC132008.2-207ENST00000454517 770 ntBASIC17.42■□□□□ 0.38
CLCNKAP51800 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
CLCNKAP51800 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.42■□□□□ 0.38
CLCNKAP51800 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.42■□□□□ 0.38
CLCNKAP51800 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLCNKAP51800 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.42■□□□□ 0.38
CLCNKAP51800 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.42■□□□□ 0.38
CLCNKAP51800 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CLCNKAP51800 AL121912.1-201ENST00000603683 238 ntBASIC17.42■□□□□ 0.38
CLCNKAP51800 AC116407.2-201ENST00000613639 860 ntBASIC17.42■□□□□ 0.38
CLCNKAP51800 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.42■□□□□ 0.38
CLCNKAP51800 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCNKAP51800 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCNKAP51800 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCNKAP51800 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.42■□□□□ 0.38
CLCNKAP51800 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCNKAP51800 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.42■□□□□ 0.38
CLCNKAP51800 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCNKAP51800 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.42■□□□□ 0.38
CLCNKAP51800 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCNKAP51800 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
CLCNKAP51800 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCNKAP51800 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.41■□□□□ 0.38
CLCNKAP51800 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCNKAP51800 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.41■□□□□ 0.38
CLCNKAP51800 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLCNKAP51800 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLCNKAP51800 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.41■□□□□ 0.38
CLCNKAP51800 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.41■□□□□ 0.38
CLCNKAP51800 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLCNKAP51800 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCNKAP51800 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CLCNKAP51800 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.41■□□□□ 0.38
CLCNKAP51800 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CLCNKAP51800 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCNKAP51800 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCNKAP51800 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLCNKAP51800 COX5BP2-201ENST00000392354 334 ntBASIC17.41■□□□□ 0.38
CLCNKAP51800 RBM17P3-201ENST00000417687 1192 ntBASIC17.41■□□□□ 0.38
CLCNKAP51800 AC026396.1-201ENST00000419388 421 ntBASIC17.41■□□□□ 0.38
CLCNKAP51800 AC106795.1-205ENST00000512851 1056 ntBASIC17.41■□□□□ 0.38
CLCNKAP51800 AL160237.2-201ENST00000556165 472 ntBASIC17.41■□□□□ 0.38
CLCNKAP51800 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.41■□□□□ 0.38
CLCNKAP51800 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CLCNKAP51800 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.41■□□□□ 0.38
CLCNKAP51800 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLCNKAP51800 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCNKAP51800 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCNKAP51800 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLCNKAP51800 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCNKAP51800 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CLCNKAP51800 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLCNKAP51800 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCNKAP51800 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCNKAP51800 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCNKAP51800 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCNKAP51800 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLCNKAP51800 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLCNKAP51800 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.41■□□□□ 0.38
CLCNKAP51800 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCNKAP51800 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCNKAP51800 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.4■□□□□ 0.38
CLCNKAP51800 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.4■□□□□ 0.38
CLCNKAP51800 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLCNKAP51800 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLCNKAP51800 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLCNKAP51800 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCNKAP51800 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCNKAP51800 AL390961.4-201ENST00000623958 2535 ntBASIC17.4■□□□□ 0.38
CLCNKAP51800 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CLCNKAP51800 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
CLCNKAP51800 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.4■□□□□ 0.38
CLCNKAP51800 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
CLCNKAP51800 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCNKAP51800 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCNKAP51800 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLCNKAP51800 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCNKAP51800 AF238378.1-201ENST00000526806 358 ntBASIC17.4■□□□□ 0.38
CLCNKAP51800 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.4■□□□□ 0.38
CLCNKAP51800 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.4■□□□□ 0.38
CLCNKAP51800 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
CLCNKAP51800 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.4■□□□□ 0.38
CLCNKAP51800 AL031008.1-201ENST00000619963 541 ntBASIC17.4■□□□□ 0.38
CLCNKAP51800 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.4■□□□□ 0.38
CLCNKAP51800 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCNKAP51800 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLCNKAP51800 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CLCNKAP51800 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.4■□□□□ 0.38
CLCNKAP51800 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCNKAP51800 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCNKAP51800 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLCNKAP51800 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CLCNKAP51800 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCNKAP51800 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.4■□□□□ 0.38
CLCNKAP51800 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCNKAP51800 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms