Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLCN3P51790 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLCN3P51790 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.47■□□□□ 0.71
CLCN3P51790 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.47■□□□□ 0.71
CLCN3P51790 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.47■□□□□ 0.71
CLCN3P51790 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.46■□□□□ 0.71
CLCN3P51790 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CLCN3P51790 FLJ13224-201ENST00000313737 1514 ntBASIC19.46■□□□□ 0.71
CLCN3P51790 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCN3P51790 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCN3P51790 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCN3P51790 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCN3P51790 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCN3P51790 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCN3P51790 SIGLEC16-201ENST00000599858 1437 ntBASIC19.46■□□□□ 0.71
CLCN3P51790 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCN3P51790 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLCN3P51790 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLCN3P51790 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.46■□□□□ 0.71
CLCN3P51790 AC098831.1-202ENST00000438821 336 ntBASIC19.46■□□□□ 0.71
CLCN3P51790 DDX43P3-201ENST00000441064 443 ntBASIC19.46■□□□□ 0.71
CLCN3P51790 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.46■□□□□ 0.71
CLCN3P51790 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.46■□□□□ 0.71
CLCN3P51790 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.46■□□□□ 0.71
CLCN3P51790 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CLCN3P51790 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
CLCN3P51790 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.46■□□□□ 0.71
CLCN3P51790 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLCN3P51790 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.46■□□□□ 0.71
CLCN3P51790 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.46■□□□□ 0.71
CLCN3P51790 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLCN3P51790 AC148477.5-201ENST00000625164 1645 ntBASIC19.46■□□□□ 0.71
CLCN3P51790 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCN3P51790 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.46■□□□□ 0.71
CLCN3P51790 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
CLCN3P51790 AP002414.3-201ENST00000589352 1468 ntBASIC19.46■□□□□ 0.71
CLCN3P51790 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCN3P51790 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCN3P51790 BX276092.7-203ENST00000637198 1536 ntBASIC19.46■□□□□ 0.71
CLCN3P51790 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCN3P51790 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.45■□□□□ 0.7
CLCN3P51790 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.45■□□□□ 0.7
CLCN3P51790 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.45■□□□□ 0.7
CLCN3P51790 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLCN3P51790 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.45■□□□□ 0.7
CLCN3P51790 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLCN3P51790 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLCN3P51790 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLCN3P51790 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLCN3P51790 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.45■□□□□ 0.7
CLCN3P51790 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.45■□□□□ 0.7
CLCN3P51790 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.45■□□□□ 0.7
CLCN3P51790 IGHV3-22-201ENST00000520721 359 ntBASIC19.45■□□□□ 0.7
CLCN3P51790 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.45■□□□□ 0.7
CLCN3P51790 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.45■□□□□ 0.7
CLCN3P51790 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLCN3P51790 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLCN3P51790 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLCN3P51790 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLCN3P51790 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLCN3P51790 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLCN3P51790 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLCN3P51790 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLCN3P51790 KRT18P55-202ENST00000578578 1546 ntBASIC19.45■□□□□ 0.7
CLCN3P51790 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.45■□□□□ 0.7
CLCN3P51790 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.45■□□□□ 0.7
CLCN3P51790 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLCN3P51790 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.45■□□□□ 0.7
CLCN3P51790 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLCN3P51790 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLCN3P51790 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CLCN3P51790 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLCN3P51790 BICD1-207ENST00000551848 1962 ntBASIC19.44■□□□□ 0.7
CLCN3P51790 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.44■□□□□ 0.7
CLCN3P51790 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN3P51790 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN3P51790 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN3P51790 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CLCN3P51790 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CLCN3P51790 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN3P51790 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CLCN3P51790 LAGE3P1-201ENST00000425356 484 ntBASIC19.44■□□□□ 0.7
CLCN3P51790 PMS2P1-201ENST00000431037 1228 ntBASIC19.44■□□□□ 0.7
CLCN3P51790 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.44■□□□□ 0.7
CLCN3P51790 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.44■□□□□ 0.7
CLCN3P51790 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN3P51790 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.44■□□□□ 0.7
CLCN3P51790 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.44■□□□□ 0.7
CLCN3P51790 ABALON-201ENST00000629058 1903 ntBASIC19.44■□□□□ 0.7
CLCN3P51790 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CLCN3P51790 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CLCN3P51790 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CLCN3P51790 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN3P51790 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.44■□□□□ 0.7
CLCN3P51790 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN3P51790 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN3P51790 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN3P51790 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN3P51790 AC138028.4-201ENST00000564984 1845 ntBASIC19.44■□□□□ 0.7
CLCN3P51790 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms