Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 Z83836.1-201ENST00000624605 1642 ntBASIC16.54■□□□□ 0.24
RNF144AP50876 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF144AP50876 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF144AP50876 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RNF144AP50876 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF144AP50876 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF144AP50876 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RNF144AP50876 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF144AP50876 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF144AP50876 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF144AP50876 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF144AP50876 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF144AP50876 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF144AP50876 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF144AP50876 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF144AP50876 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF144AP50876 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF144AP50876 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF144AP50876 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RNF144AP50876 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF144AP50876 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF144AP50876 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF144AP50876 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF144AP50876 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF144AP50876 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF144AP50876 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF144AP50876 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF144AP50876 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF144AP50876 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF144AP50876 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF144AP50876 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF144AP50876 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF144AP50876 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF144AP50876 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF144AP50876 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF144AP50876 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF144AP50876 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF144AP50876 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.53■□□□□ 0.24
RNF144AP50876 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF144AP50876 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF144AP50876 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF144AP50876 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.53■□□□□ 0.24
RNF144AP50876 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.53■□□□□ 0.24
RNF144AP50876 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.53■□□□□ 0.24
RNF144AP50876 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
RNF144AP50876 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF144AP50876 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.53■□□□□ 0.24
RNF144AP50876 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF144AP50876 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF144AP50876 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF144AP50876 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF144AP50876 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
RNF144AP50876 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF144AP50876 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF144AP50876 AC139713.2-201ENST00000641328 2723 ntBASIC16.53■□□□□ 0.24
RNF144AP50876 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF144AP50876 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF144AP50876 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNF144AP50876 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF144AP50876 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
RNF144AP50876 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF144AP50876 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNF144AP50876 AC009949.1-201ENST00000623048 1830 ntBASIC16.52■□□□□ 0.24
RNF144AP50876 AC006116.8-202ENST00000587620 1550 ntBASIC16.52■□□□□ 0.24
RNF144AP50876 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.52■□□□□ 0.24
RNF144AP50876 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF144AP50876 PP12613-201ENST00000424958 2230 ntBASIC16.52■□□□□ 0.24
RNF144AP50876 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF144AP50876 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF144AP50876 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF144AP50876 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF144AP50876 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF144AP50876 MIR662-201ENST00000384847 95 ntBASIC16.52■□□□□ 0.24
RNF144AP50876 IGHGP-201ENST00000390555 1178 ntBASIC16.52■□□□□ 0.24
RNF144AP50876 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.52■□□□□ 0.24
RNF144AP50876 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNF144AP50876 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNF144AP50876 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.52■□□□□ 0.24
RNF144AP50876 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.52■□□□□ 0.24
RNF144AP50876 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.52■□□□□ 0.24
RNF144AP50876 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF144AP50876 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF144AP50876 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
RNF144AP50876 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.52■□□□□ 0.23
RNF144AP50876 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
RNF144AP50876 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF144AP50876 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RNF144AP50876 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF144AP50876 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
RNF144AP50876 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RNF144AP50876 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.52■□□□□ 0.23
RNF144AP50876 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF144AP50876 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF144AP50876 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RNF144AP50876 KRT8P47-201ENST00000604727 1398 ntBASIC16.51■□□□□ 0.23
RNF144AP50876 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF144AP50876 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF144AP50876 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF144AP50876 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RNF144AP50876 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms