Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBP50607 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBP50607 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBP50607 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBP50607 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.7■□□□□ 0.58
TUBP50607 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.7■□□□□ 0.58
TUBP50607 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TUBP50607 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.7■□□□□ 0.58
TUBP50607 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TUBP50607 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
TUBP50607 AL591684.3-201ENST00000605187 298 ntBASIC18.7■□□□□ 0.58
TUBP50607 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TUBP50607 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBP50607 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TUBP50607 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBP50607 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TUBP50607 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBP50607 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBP50607 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBP50607 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBP50607 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBP50607 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.69■□□□□ 0.58
TUBP50607 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TUBP50607 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
TUBP50607 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TUBP50607 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.69■□□□□ 0.58
TUBP50607 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TUBP50607 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TUBP50607 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TUBP50607 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TUBP50607 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TUBP50607 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
TUBP50607 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TUBP50607 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TUBP50607 AKR1C7P-201ENST00000305623 895 ntBASIC18.69■□□□□ 0.58
TUBP50607 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
TUBP50607 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.69■□□□□ 0.58
TUBP50607 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.69■□□□□ 0.58
TUBP50607 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
TUBP50607 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.69■□□□□ 0.58
TUBP50607 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TUBP50607 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.69■□□□□ 0.58
TUBP50607 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.69■□□□□ 0.58
TUBP50607 AC104692.2-201ENST00000603054 253 ntBASIC18.69■□□□□ 0.58
TUBP50607 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TUBP50607 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TUBP50607 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.69■□□□□ 0.58
TUBP50607 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TUBP50607 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.69■□□□□ 0.58
TUBP50607 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.69■□□□□ 0.58
TUBP50607 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TUBP50607 AC097374.2-201ENST00000618617 1306 ntBASIC18.69■□□□□ 0.58
TUBP50607 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TUBP50607 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TUBP50607 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.69■□□□□ 0.58
TUBP50607 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TUBP50607 REXO1L9P-201ENST00000604264 2108 ntBASIC18.68■□□□□ 0.58
TUBP50607 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBP50607 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TUBP50607 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.68■□□□□ 0.58
TUBP50607 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TUBP50607 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TUBP50607 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.68■□□□□ 0.58
TUBP50607 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBP50607 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TUBP50607 RCN1P2-201ENST00000398357 915 ntBASIC18.68■□□□□ 0.58
TUBP50607 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.68■□□□□ 0.58
TUBP50607 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.68■□□□□ 0.58
TUBP50607 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.68■□□□□ 0.58
TUBP50607 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.68■□□□□ 0.58
TUBP50607 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TUBP50607 AL121912.1-201ENST00000603683 238 ntBASIC18.68■□□□□ 0.58
TUBP50607 AL031008.1-201ENST00000619963 541 ntBASIC18.68■□□□□ 0.58
TUBP50607 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
TUBP50607 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TUBP50607 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.68■□□□□ 0.58
TUBP50607 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
TUBP50607 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.68■□□□□ 0.58
TUBP50607 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TUBP50607 ABALON-201ENST00000629058 1903 ntBASIC18.68■□□□□ 0.58
TUBP50607 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBP50607 AC022898.2-201ENST00000616822 1312 ntBASIC18.68■□□□□ 0.58
TUBP50607 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TUBP50607 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBP50607 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBP50607 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.68■□□□□ 0.58
TUBP50607 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
TUBP50607 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TUBP50607 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBP50607 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
TUBP50607 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TUBP50607 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.67■□□□□ 0.58
TUBP50607 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBP50607 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TUBP50607 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TUBP50607 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.67■□□□□ 0.58
TUBP50607 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBP50607 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TUBP50607 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBP50607 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms