Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC22.18■■□□□ 1.14
RFC4P35249 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RFC4P35249 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RFC4P35249 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RFC4P35249 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC22.18■■□□□ 1.14
RFC4P35249 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
RFC4P35249 PC-208ENST00000529047 1607 ntTSL 3 BASIC22.18■■□□□ 1.14
RFC4P35249 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC22.18■■□□□ 1.14
RFC4P35249 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
RFC4P35249 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RFC4P35249 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC22.18■■□□□ 1.14
RFC4P35249 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC22.18■■□□□ 1.14
RFC4P35249 PTMS-202ENST00000389462 773 ntTSL 2 BASIC22.18■■□□□ 1.14
RFC4P35249 HLA-J-203ENST00000494367 1087 ntBASIC22.18■■□□□ 1.14
RFC4P35249 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RFC4P35249 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RFC4P35249 RPL28-205ENST00000558131 444 ntTSL 5 BASIC22.18■■□□□ 1.14
RFC4P35249 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RFC4P35249 AL353135.1-201ENST00000606729 504 ntBASIC22.18■■□□□ 1.14
RFC4P35249 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
RFC4P35249 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC22.18■■□□□ 1.14
RFC4P35249 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
RFC4P35249 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RFC4P35249 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC22.18■■□□□ 1.14
RFC4P35249 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
RFC4P35249 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RFC4P35249 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RFC4P35249 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RFC4P35249 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RFC4P35249 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RFC4P35249 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RFC4P35249 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
RFC4P35249 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RFC4P35249 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC22.17■■□□□ 1.14
RFC4P35249 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RFC4P35249 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
RFC4P35249 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC22.17■■□□□ 1.14
RFC4P35249 AC092474.2-201ENST00000424288 719 ntBASIC22.17■■□□□ 1.14
RFC4P35249 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC22.17■■□□□ 1.14
RFC4P35249 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
RFC4P35249 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RFC4P35249 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC22.17■■□□□ 1.14
RFC4P35249 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RFC4P35249 DAD1-205ENST00000543337 501 ntTSL 3 BASIC22.17■■□□□ 1.14
RFC4P35249 AC025678.2-201ENST00000562061 970 ntBASIC22.17■■□□□ 1.14
RFC4P35249 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC22.17■■□□□ 1.14
RFC4P35249 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC22.17■■□□□ 1.14
RFC4P35249 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC22.17■■□□□ 1.14
RFC4P35249 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RFC4P35249 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RFC4P35249 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RFC4P35249 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RFC4P35249 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC22.16■■□□□ 1.14
RFC4P35249 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC22.16■■□□□ 1.14
RFC4P35249 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RFC4P35249 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC22.16■■□□□ 1.14
RFC4P35249 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
RFC4P35249 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RFC4P35249 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
RFC4P35249 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RFC4P35249 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
RFC4P35249 LINC00982-205ENST00000420957 435 ntBASIC22.16■■□□□ 1.14
RFC4P35249 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RFC4P35249 AC244107.1-201ENST00000442033 332 ntBASIC22.16■■□□□ 1.14
RFC4P35249 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC22.16■■□□□ 1.14
RFC4P35249 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC22.16■■□□□ 1.14
RFC4P35249 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
RFC4P35249 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
RFC4P35249 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RFC4P35249 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RFC4P35249 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RFC4P35249 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RFC4P35249 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RFC4P35249 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.15■■□□□ 1.14
RFC4P35249 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC22.15■■□□□ 1.14
RFC4P35249 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
RFC4P35249 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC22.15■■□□□ 1.14
RFC4P35249 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC22.15■■□□□ 1.14
RFC4P35249 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
RFC4P35249 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC22.15■■□□□ 1.14
RFC4P35249 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC22.15■■□□□ 1.14
RFC4P35249 IGHV3-52-201ENST00000519770 353 ntBASIC22.15■■□□□ 1.14
RFC4P35249 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RFC4P35249 GREM1-201ENST00000560677 623 ntTSL 4 BASIC22.15■■□□□ 1.14
RFC4P35249 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC22.15■■□□□ 1.14
RFC4P35249 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RFC4P35249 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC22.15■■□□□ 1.14
RFC4P35249 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RFC4P35249 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC22.15■■□□□ 1.14
RFC4P35249 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RFC4P35249 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RFC4P35249 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC22.15■■□□□ 1.14
RFC4P35249 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RFC4P35249 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RFC4P35249 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RFC4P35249 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
RFC4P35249 PI4KAP1-204ENST00000612579 1703 ntBASIC22.14■■□□□ 1.14
RFC4P35249 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
RFC4P35249 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RFC4P35249 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms