Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.3■□□□□ 0.04
CD40P25942 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD40P25942 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.3■□□□□ 0.04
CD40P25942 AC148477.8-201ENST00000624298 468 ntBASIC15.3■□□□□ 0.04
CD40P25942 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD40P25942 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD40P25942 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC15.29■□□□□ 0.04
CD40P25942 AL020996.1-203ENST00000536896 2307 ntBASIC15.29■□□□□ 0.04
CD40P25942 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.29■□□□□ 0.04
CD40P25942 HTR7P1-202ENST00000624664 4411 ntBASIC15.29■□□□□ 0.04
CD40P25942 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
CD40P25942 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.29■□□□□ 0.04
CD40P25942 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD40P25942 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.29■□□□□ 0.04
CD40P25942 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD40P25942 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CD40P25942 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD40P25942 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
CD40P25942 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD40P25942 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.29■□□□□ 0.04
CD40P25942 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD40P25942 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.29■□□□□ 0.04
CD40P25942 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD40P25942 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD40P25942 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD40P25942 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CD40P25942 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD40P25942 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CD40P25942 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.29■□□□□ 0.04
CD40P25942 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD40P25942 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CD40P25942 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.29■□□□□ 0.04
CD40P25942 AC093909.1-201ENST00000504731 1122 ntBASIC15.29■□□□□ 0.04
CD40P25942 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.29■□□□□ 0.04
CD40P25942 RNA5SP419-201ENST00000515908 135 ntBASIC15.29■□□□□ 0.04
CD40P25942 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD40P25942 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.29■□□□□ 0.04
CD40P25942 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CD40P25942 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.29■□□□□ 0.04
CD40P25942 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.29■□□□□ 0.04
CD40P25942 AD001527.2-201ENST00000622994 785 ntBASIC15.29■□□□□ 0.04
CD40P25942 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
CD40P25942 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC15.29■□□□□ 0.04
CD40P25942 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.29■□□□□ 0.04
CD40P25942 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD40P25942 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD40P25942 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CD40P25942 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD40P25942 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CD40P25942 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD40P25942 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD40P25942 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.29■□□□□ 0.04
CD40P25942 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CD40P25942 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD40P25942 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD40P25942 AC009949.1-201ENST00000623048 1830 ntBASIC15.29■□□□□ 0.04
CD40P25942 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CD40P25942 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CD40P25942 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.28■□□□□ 0.04
CD40P25942 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.28■□□□□ 0.04
CD40P25942 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CD40P25942 PMPCAP1-201ENST00000508114 1576 ntBASIC15.28■□□□□ 0.04
CD40P25942 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD40P25942 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CD40P25942 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CD40P25942 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD40P25942 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD40P25942 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD40P25942 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
CD40P25942 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD40P25942 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD40P25942 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD40P25942 RPS2P28-201ENST00000314255 741 ntBASIC15.28■□□□□ 0.04
CD40P25942 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD40P25942 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD40P25942 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD40P25942 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.28■□□□□ 0.04
CD40P25942 DDX43P3-201ENST00000441064 443 ntBASIC15.28■□□□□ 0.04
CD40P25942 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CD40P25942 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.28■□□□□ 0.04
CD40P25942 AC021087.4-201ENST00000563761 564 ntBASIC15.28■□□□□ 0.04
CD40P25942 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CD40P25942 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.28■□□□□ 0.04
CD40P25942 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CD40P25942 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.28■□□□□ 0.04
CD40P25942 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CD40P25942 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.28■□□□□ 0.04
CD40P25942 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD40P25942 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.28■□□□□ 0.04
CD40P25942 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD40P25942 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD40P25942 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD40P25942 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CD40P25942 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CD40P25942 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CD40P25942 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD40P25942 BX276092.7-203ENST00000637198 1536 ntBASIC15.27■□□□□ 0.04
CD40P25942 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CD40P25942 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC15.27■□□□□ 0.04
CD40P25942 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms