Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH3P22223 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.41■□□□□ 0.38
CDH3P22223 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
CDH3P22223 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH3P22223 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH3P22223 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH3P22223 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH3P22223 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.41■□□□□ 0.38
CDH3P22223 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH3P22223 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CDH3P22223 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CDH3P22223 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CDH3P22223 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.41■□□□□ 0.38
CDH3P22223 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.41■□□□□ 0.38
CDH3P22223 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH3P22223 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH3P22223 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH3P22223 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH3P22223 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH3P22223 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CDH3P22223 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH3P22223 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CDH3P22223 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CDH3P22223 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH3P22223 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH3P22223 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH3P22223 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH3P22223 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH3P22223 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH3P22223 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CDH3P22223 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH3P22223 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH3P22223 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CDH3P22223 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH3P22223 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH3P22223 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH3P22223 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH3P22223 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CDH3P22223 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.4■□□□□ 0.38
CDH3P22223 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH3P22223 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH3P22223 NUS1P1-201ENST00000446295 882 ntBASIC17.4■□□□□ 0.38
CDH3P22223 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH3P22223 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH3P22223 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.4■□□□□ 0.38
CDH3P22223 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH3P22223 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH3P22223 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.4■□□□□ 0.38
CDH3P22223 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CDH3P22223 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.4■□□□□ 0.38
CDH3P22223 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
CDH3P22223 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH3P22223 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH3P22223 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH3P22223 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH3P22223 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CDH3P22223 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH3P22223 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.4■□□□□ 0.38
CDH3P22223 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH3P22223 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CDH3P22223 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH3P22223 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH3P22223 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
CDH3P22223 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
CDH3P22223 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH3P22223 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH3P22223 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CDH3P22223 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH3P22223 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.39■□□□□ 0.38
CDH3P22223 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CDH3P22223 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CDH3P22223 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH3P22223 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH3P22223 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH3P22223 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH3P22223 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CDH3P22223 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.39■□□□□ 0.37
CDH3P22223 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH3P22223 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CDH3P22223 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH3P22223 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH3P22223 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH3P22223 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH3P22223 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH3P22223 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH3P22223 KRT17P6-201ENST00000453795 1220 ntBASIC17.39■□□□□ 0.37
CDH3P22223 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.39■□□□□ 0.37
CDH3P22223 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH3P22223 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH3P22223 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.39■□□□□ 0.37
CDH3P22223 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.39■□□□□ 0.37
CDH3P22223 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH3P22223 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
CDH3P22223 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH3P22223 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH3P22223 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH3P22223 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CDH3P22223 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH3P22223 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
CDH3P22223 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms