Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
KCNA3P22001 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
KCNA3P22001 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
KCNA3P22001 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
KCNA3P22001 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
KCNA3P22001 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC21.61■■□□□ 1.05
KCNA3P22001 FAM58DP-201ENST00000428076 619 ntBASIC21.61■■□□□ 1.05
KCNA3P22001 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC21.61■■□□□ 1.05
KCNA3P22001 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC21.61■■□□□ 1.05
KCNA3P22001 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC21.61■■□□□ 1.05
KCNA3P22001 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC21.61■■□□□ 1.05
KCNA3P22001 AC112191.1-201ENST00000523689 701 ntBASIC21.61■■□□□ 1.05
KCNA3P22001 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC21.61■■□□□ 1.05
KCNA3P22001 TMED1-207ENST00000591695 809 ntTSL 5 BASIC21.61■■□□□ 1.05
KCNA3P22001 AC099522.2-201ENST00000607001 744 ntBASIC21.61■■□□□ 1.05
KCNA3P22001 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC21.61■■□□□ 1.05
KCNA3P22001 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
KCNA3P22001 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
KCNA3P22001 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC21.61■■□□□ 1.05
KCNA3P22001 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
KCNA3P22001 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
KCNA3P22001 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC21.6■■□□□ 1.05
KCNA3P22001 PI4KAP1-204ENST00000612579 1703 ntBASIC21.6■■□□□ 1.05
KCNA3P22001 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
KCNA3P22001 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KCNA3P22001 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KCNA3P22001 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
KCNA3P22001 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC21.6■■□□□ 1.05
KCNA3P22001 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.6■■□□□ 1.05
KCNA3P22001 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KCNA3P22001 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KCNA3P22001 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
KCNA3P22001 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KCNA3P22001 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
KCNA3P22001 FALEC-201ENST00000416894 566 ntTSL 3 BASIC21.6■■□□□ 1.05
KCNA3P22001 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC21.6■■□□□ 1.05
KCNA3P22001 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
KCNA3P22001 AC069335.1-201ENST00000489972 472 ntBASIC21.6■■□□□ 1.05
KCNA3P22001 STK19B-204ENST00000512515 211 ntBASIC21.6■■□□□ 1.05
KCNA3P22001 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC21.6■■□□□ 1.05
KCNA3P22001 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
KCNA3P22001 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.6■■□□□ 1.05
KCNA3P22001 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
KCNA3P22001 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.6■■□□□ 1.05
KCNA3P22001 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KCNA3P22001 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KCNA3P22001 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KCNA3P22001 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
KCNA3P22001 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
KCNA3P22001 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
KCNA3P22001 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC21.59■■□□□ 1.05
KCNA3P22001 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC21.59■■□□□ 1.05
KCNA3P22001 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
KCNA3P22001 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
KCNA3P22001 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
KCNA3P22001 MIR943-201ENST00000401286 94 ntBASIC21.59■■□□□ 1.05
KCNA3P22001 RAC2-204ENST00000406508 893 ntTSL 5 BASIC21.59■■□□□ 1.05
KCNA3P22001 AL355306.1-201ENST00000415580 579 ntBASIC21.59■■□□□ 1.05
KCNA3P22001 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC21.59■■□□□ 1.05
KCNA3P22001 GPS2P2-201ENST00000430745 888 ntBASIC21.59■■□□□ 1.05
KCNA3P22001 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC21.59■■□□□ 1.05
KCNA3P22001 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
KCNA3P22001 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC21.59■■□□□ 1.05
KCNA3P22001 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC21.59■■□□□ 1.05
KCNA3P22001 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC21.59■■□□□ 1.05
KCNA3P22001 DUX4L17-201ENST00000557360 1267 ntBASIC21.59■■□□□ 1.05
KCNA3P22001 LINC02560-201ENST00000596379 459 ntBASIC21.59■■□□□ 1.05
KCNA3P22001 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
KCNA3P22001 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.59■■□□□ 1.05
KCNA3P22001 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
KCNA3P22001 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
KCNA3P22001 RNF165-205ENST00000588679 2904 ntBASIC21.59■■□□□ 1.05
KCNA3P22001 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
KCNA3P22001 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
KCNA3P22001 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
KCNA3P22001 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
KCNA3P22001 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
KCNA3P22001 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
KCNA3P22001 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.58■■□□□ 1.05
KCNA3P22001 AC073130.3-201ENST00000624389 2278 ntBASIC21.58■■□□□ 1.05
KCNA3P22001 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
KCNA3P22001 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.58■■□□□ 1.05
KCNA3P22001 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
KCNA3P22001 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC21.58■■□□□ 1.05
KCNA3P22001 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
KCNA3P22001 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
KCNA3P22001 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
KCNA3P22001 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
KCNA3P22001 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
KCNA3P22001 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
KCNA3P22001 CNN2P2-201ENST00000443536 909 ntBASIC21.58■■□□□ 1.05
KCNA3P22001 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC21.58■■□□□ 1.05
KCNA3P22001 CNN2P3-201ENST00000450201 906 ntBASIC21.58■■□□□ 1.05
KCNA3P22001 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
KCNA3P22001 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC21.58■■□□□ 1.05
KCNA3P22001 AL136317.3-201ENST00000618497 906 ntBASIC21.58■■□□□ 1.05
KCNA3P22001 AC008761.3-201ENST00000624803 892 ntBASIC21.58■■□□□ 1.05
KCNA3P22001 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC21.58■■□□□ 1.05
KCNA3P22001 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
KCNA3P22001 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms