Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TNFRSF1BP20333 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.52■□□□□ 0.24
TNFRSF1BP20333 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.52■□□□□ 0.24
TNFRSF1BP20333 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TNFRSF1BP20333 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TNFRSF1BP20333 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.52■□□□□ 0.24
TNFRSF1BP20333 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.52■□□□□ 0.24
TNFRSF1BP20333 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.52■□□□□ 0.24
TNFRSF1BP20333 PVRIG2P-201ENST00000435460 978 ntBASIC16.52■□□□□ 0.24
TNFRSF1BP20333 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.52■□□□□ 0.24
TNFRSF1BP20333 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.52■□□□□ 0.24
TNFRSF1BP20333 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TNFRSF1BP20333 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.52■□□□□ 0.24
TNFRSF1BP20333 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TNFRSF1BP20333 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.52■□□□□ 0.24
TNFRSF1BP20333 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TNFRSF1BP20333 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.52■□□□□ 0.24
TNFRSF1BP20333 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.52■□□□□ 0.24
TNFRSF1BP20333 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.52■□□□□ 0.23
TNFRSF1BP20333 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
TNFRSF1BP20333 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.23
TNFRSF1BP20333 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.52■□□□□ 0.23
TNFRSF1BP20333 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TNFRSF1BP20333 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.52■□□□□ 0.23
TNFRSF1BP20333 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.52■□□□□ 0.23
TNFRSF1BP20333 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TNFRSF1BP20333 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.52■□□□□ 0.23
TNFRSF1BP20333 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.52■□□□□ 0.23
TNFRSF1BP20333 TNRC18P3-201ENST00000441896 2691 ntBASIC16.52■□□□□ 0.23
TNFRSF1BP20333 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TNFRSF1BP20333 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.52■□□□□ 0.23
TNFRSF1BP20333 KRT8P47-201ENST00000604727 1398 ntBASIC16.51■□□□□ 0.23
TNFRSF1BP20333 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.51■□□□□ 0.23
TNFRSF1BP20333 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNFRSF1BP20333 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TNFRSF1BP20333 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNFRSF1BP20333 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNFRSF1BP20333 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.51■□□□□ 0.23
TNFRSF1BP20333 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.51■□□□□ 0.23
TNFRSF1BP20333 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNFRSF1BP20333 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.51■□□□□ 0.23
TNFRSF1BP20333 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNFRSF1BP20333 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TNFRSF1BP20333 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNFRSF1BP20333 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TNFRSF1BP20333 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNFRSF1BP20333 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.51■□□□□ 0.23
TNFRSF1BP20333 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.51■□□□□ 0.23
TNFRSF1BP20333 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.51■□□□□ 0.23
TNFRSF1BP20333 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.51■□□□□ 0.23
TNFRSF1BP20333 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TNFRSF1BP20333 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.51■□□□□ 0.23
TNFRSF1BP20333 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNFRSF1BP20333 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.51■□□□□ 0.23
TNFRSF1BP20333 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNFRSF1BP20333 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNFRSF1BP20333 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.51■□□□□ 0.23
TNFRSF1BP20333 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNFRSF1BP20333 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.51■□□□□ 0.23
TNFRSF1BP20333 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNFRSF1BP20333 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNFRSF1BP20333 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TNFRSF1BP20333 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TNFRSF1BP20333 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFRSF1BP20333 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFRSF1BP20333 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.5■□□□□ 0.23
TNFRSF1BP20333 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFRSF1BP20333 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFRSF1BP20333 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.5■□□□□ 0.23
TNFRSF1BP20333 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
TNFRSF1BP20333 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFRSF1BP20333 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFRSF1BP20333 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFRSF1BP20333 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TNFRSF1BP20333 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.5■□□□□ 0.23
TNFRSF1BP20333 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.5■□□□□ 0.23
TNFRSF1BP20333 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.5■□□□□ 0.23
TNFRSF1BP20333 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.5■□□□□ 0.23
TNFRSF1BP20333 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.5■□□□□ 0.23
TNFRSF1BP20333 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.5■□□□□ 0.23
TNFRSF1BP20333 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TNFRSF1BP20333 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.5■□□□□ 0.23
TNFRSF1BP20333 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.5■□□□□ 0.23
TNFRSF1BP20333 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFRSF1BP20333 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TNFRSF1BP20333 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TNFRSF1BP20333 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFRSF1BP20333 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TNFRSF1BP20333 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
TNFRSF1BP20333 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFRSF1BP20333 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFRSF1BP20333 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.5■□□□□ 0.23
TNFRSF1BP20333 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TNFRSF1BP20333 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.49■□□□□ 0.23
TNFRSF1BP20333 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
TNFRSF1BP20333 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TNFRSF1BP20333 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
TNFRSF1BP20333 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.49■□□□□ 0.23
TNFRSF1BP20333 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNFRSF1BP20333 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms