Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 VENTXP7-201ENST00000475503 772 ntBASIC18.28■□□□□ 0.52
ERCC2P18074 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.28■□□□□ 0.52
ERCC2P18074 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC2P18074 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
ERCC2P18074 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.28■□□□□ 0.52
ERCC2P18074 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC2P18074 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
ERCC2P18074 AC093458.2-201ENST00000623150 629 ntBASIC18.28■□□□□ 0.52
ERCC2P18074 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC2P18074 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC2P18074 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC2P18074 LINC00304-203ENST00000565008 1864 ntBASIC18.28■□□□□ 0.52
ERCC2P18074 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
ERCC2P18074 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
ERCC2P18074 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC2P18074 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC2P18074 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC2P18074 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC2P18074 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC2P18074 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.28■□□□□ 0.52
ERCC2P18074 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
ERCC2P18074 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ERCC2P18074 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ERCC2P18074 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ERCC2P18074 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.27■□□□□ 0.52
ERCC2P18074 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ERCC2P18074 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ERCC2P18074 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ERCC2P18074 UPK3BP1-201ENST00000428678 509 ntBASIC18.27■□□□□ 0.52
ERCC2P18074 LINC00265-3P-201ENST00000447588 903 ntBASIC18.27■□□□□ 0.52
ERCC2P18074 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.27■□□□□ 0.52
ERCC2P18074 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.27■□□□□ 0.52
ERCC2P18074 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.27■□□□□ 0.52
ERCC2P18074 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ERCC2P18074 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.27■□□□□ 0.52
ERCC2P18074 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.27■□□□□ 0.52
ERCC2P18074 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ERCC2P18074 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.27■□□□□ 0.52
ERCC2P18074 AC092119.3-201ENST00000612618 583 ntBASIC18.27■□□□□ 0.52
ERCC2P18074 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
ERCC2P18074 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ERCC2P18074 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
ERCC2P18074 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.27■□□□□ 0.52
ERCC2P18074 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ERCC2P18074 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ERCC2P18074 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ERCC2P18074 AC026471.1-201ENST00000564629 3026 ntBASIC18.27■□□□□ 0.51
ERCC2P18074 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
ERCC2P18074 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.27■□□□□ 0.51
ERCC2P18074 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC2P18074 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC2P18074 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC2P18074 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC2P18074 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.26■□□□□ 0.51
ERCC2P18074 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
ERCC2P18074 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.26■□□□□ 0.51
ERCC2P18074 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.26■□□□□ 0.51
ERCC2P18074 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC2P18074 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC2P18074 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC2P18074 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.26■□□□□ 0.51
ERCC2P18074 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC2P18074 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
ERCC2P18074 AC007967.3-201ENST00000434308 558 ntBASIC18.26■□□□□ 0.51
ERCC2P18074 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC2P18074 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.26■□□□□ 0.51
ERCC2P18074 Z69720.1-201ENST00000601483 472 ntBASIC18.26■□□□□ 0.51
ERCC2P18074 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.26■□□□□ 0.51
ERCC2P18074 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC2P18074 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC2P18074 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC2P18074 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC2P18074 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
ERCC2P18074 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC2P18074 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC2P18074 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC2P18074 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC2P18074 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
ERCC2P18074 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC2P18074 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC2P18074 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.25■□□□□ 0.51
ERCC2P18074 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC2P18074 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
ERCC2P18074 AC133963.1-201ENST00000504166 1679 ntBASIC18.25■□□□□ 0.51
ERCC2P18074 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC2P18074 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.25■□□□□ 0.51
ERCC2P18074 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC2P18074 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC2P18074 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.25■□□□□ 0.51
ERCC2P18074 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC2P18074 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
ERCC2P18074 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
ERCC2P18074 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.25■□□□□ 0.51
ERCC2P18074 COX5BP2-201ENST00000392354 334 ntBASIC18.25■□□□□ 0.51
ERCC2P18074 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC2P18074 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.25■□□□□ 0.51
ERCC2P18074 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.25■□□□□ 0.51
ERCC2P18074 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.25■□□□□ 0.51
ERCC2P18074 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.25■□□□□ 0.51
ERCC2P18074 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms