Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
H2AFXP16104 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
H2AFXP16104 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.44■□□□□ 0.54
H2AFXP16104 DBET-201ENST00000630918 3363 ntBASIC18.44■□□□□ 0.54
H2AFXP16104 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.44■□□□□ 0.54
H2AFXP16104 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
H2AFXP16104 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
H2AFXP16104 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
H2AFXP16104 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
H2AFXP16104 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
H2AFXP16104 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
H2AFXP16104 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.44■□□□□ 0.54
H2AFXP16104 SLC25A1P3-201ENST00000395415 828 ntBASIC18.44■□□□□ 0.54
H2AFXP16104 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.44■□□□□ 0.54
H2AFXP16104 DUSP5P2-201ENST00000426873 1033 ntBASIC18.44■□□□□ 0.54
H2AFXP16104 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.44■□□□□ 0.54
H2AFXP16104 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.44■□□□□ 0.54
H2AFXP16104 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
H2AFXP16104 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.44■□□□□ 0.54
H2AFXP16104 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.44■□□□□ 0.54
H2AFXP16104 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.44■□□□□ 0.54
H2AFXP16104 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
H2AFXP16104 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
H2AFXP16104 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
H2AFXP16104 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
H2AFXP16104 AC099063.4-201ENST00000641099 1602 ntBASIC18.44■□□□□ 0.54
H2AFXP16104 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
H2AFXP16104 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
H2AFXP16104 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
H2AFXP16104 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.44■□□□□ 0.54
H2AFXP16104 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
H2AFXP16104 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
H2AFXP16104 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
H2AFXP16104 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.43■□□□□ 0.54
H2AFXP16104 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.43■□□□□ 0.54
H2AFXP16104 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.43■□□□□ 0.54
H2AFXP16104 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
H2AFXP16104 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
H2AFXP16104 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
H2AFXP16104 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
H2AFXP16104 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
H2AFXP16104 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
H2AFXP16104 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
H2AFXP16104 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
H2AFXP16104 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.43■□□□□ 0.54
H2AFXP16104 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
H2AFXP16104 AC091390.4-202ENST00000476426 537 ntBASIC18.43■□□□□ 0.54
H2AFXP16104 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.43■□□□□ 0.54
H2AFXP16104 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
H2AFXP16104 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.43■□□□□ 0.54
H2AFXP16104 CKBP1-201ENST00000565489 1086 ntBASIC18.43■□□□□ 0.54
H2AFXP16104 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.43■□□□□ 0.54
H2AFXP16104 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
H2AFXP16104 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
H2AFXP16104 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
H2AFXP16104 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
H2AFXP16104 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
H2AFXP16104 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
H2AFXP16104 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.43■□□□□ 0.54
H2AFXP16104 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
H2AFXP16104 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
H2AFXP16104 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.43■□□□□ 0.54
H2AFXP16104 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
H2AFXP16104 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
H2AFXP16104 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
H2AFXP16104 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
H2AFXP16104 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
H2AFXP16104 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
H2AFXP16104 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
H2AFXP16104 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
H2AFXP16104 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
H2AFXP16104 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.42■□□□□ 0.54
H2AFXP16104 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.42■□□□□ 0.54
H2AFXP16104 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
H2AFXP16104 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
H2AFXP16104 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.42■□□□□ 0.54
H2AFXP16104 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.42■□□□□ 0.54
H2AFXP16104 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
H2AFXP16104 NBPF21P-201ENST00000425093 1451 ntBASIC18.42■□□□□ 0.54
H2AFXP16104 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
H2AFXP16104 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.42■□□□□ 0.54
H2AFXP16104 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
H2AFXP16104 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.42■□□□□ 0.54
H2AFXP16104 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.42■□□□□ 0.54
H2AFXP16104 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
H2AFXP16104 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
H2AFXP16104 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
H2AFXP16104 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.42■□□□□ 0.54
H2AFXP16104 AC006015.1-201ENST00000429970 570 ntBASIC18.42■□□□□ 0.54
H2AFXP16104 MCCD1P1-208ENST00000445732 328 ntBASIC18.42■□□□□ 0.54
H2AFXP16104 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.42■□□□□ 0.54
H2AFXP16104 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
H2AFXP16104 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
H2AFXP16104 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
H2AFXP16104 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
H2AFXP16104 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.42■□□□□ 0.54
H2AFXP16104 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.42■□□□□ 0.54
H2AFXP16104 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
H2AFXP16104 AC022898.2-201ENST00000616822 1312 ntBASIC18.42■□□□□ 0.54
H2AFXP16104 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms