Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LAMP1P11279 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LAMP1P11279 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LAMP1P11279 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
LAMP1P11279 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.84■□□□□ 0.29
LAMP1P11279 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LAMP1P11279 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LAMP1P11279 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LAMP1P11279 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LAMP1P11279 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LAMP1P11279 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LAMP1P11279 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
LAMP1P11279 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LAMP1P11279 MIR662-201ENST00000384847 95 ntBASIC16.84■□□□□ 0.29
LAMP1P11279 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.84■□□□□ 0.29
LAMP1P11279 TSPY5P-201ENST00000426936 936 ntBASIC16.84■□□□□ 0.29
LAMP1P11279 KRT18P57-201ENST00000443599 1254 ntBASIC16.84■□□□□ 0.29
LAMP1P11279 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.84■□□□□ 0.29
LAMP1P11279 AP003733.1-201ENST00000491725 852 ntBASIC16.84■□□□□ 0.29
LAMP1P11279 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.84■□□□□ 0.29
LAMP1P11279 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
LAMP1P11279 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LAMP1P11279 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LAMP1P11279 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LAMP1P11279 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.84■□□□□ 0.29
LAMP1P11279 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LAMP1P11279 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LAMP1P11279 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LAMP1P11279 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LAMP1P11279 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.84■□□□□ 0.29
LAMP1P11279 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LAMP1P11279 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LAMP1P11279 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LAMP1P11279 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
LAMP1P11279 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LAMP1P11279 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LAMP1P11279 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LAMP1P11279 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
LAMP1P11279 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
LAMP1P11279 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.29
LAMP1P11279 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
LAMP1P11279 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
LAMP1P11279 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LAMP1P11279 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
LAMP1P11279 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LAMP1P11279 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LAMP1P11279 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LAMP1P11279 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LAMP1P11279 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LAMP1P11279 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.83■□□□□ 0.28
LAMP1P11279 AL353692.3-201ENST00000407031 1396 ntBASIC16.83■□□□□ 0.28
LAMP1P11279 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LAMP1P11279 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
LAMP1P11279 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LAMP1P11279 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.83■□□□□ 0.28
LAMP1P11279 ZNF444P1-201ENST00000559497 298 ntBASIC16.83■□□□□ 0.28
LAMP1P11279 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.83■□□□□ 0.28
LAMP1P11279 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.83■□□□□ 0.28
LAMP1P11279 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.83■□□□□ 0.28
LAMP1P11279 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LAMP1P11279 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LAMP1P11279 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
LAMP1P11279 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
LAMP1P11279 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LAMP1P11279 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LAMP1P11279 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.83■□□□□ 0.28
LAMP1P11279 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.82■□□□□ 0.28
LAMP1P11279 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
LAMP1P11279 AC009053.2-201ENST00000563701 2365 ntBASIC16.82■□□□□ 0.28
LAMP1P11279 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LAMP1P11279 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
LAMP1P11279 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
LAMP1P11279 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
LAMP1P11279 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LAMP1P11279 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.82■□□□□ 0.28
LAMP1P11279 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
LAMP1P11279 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
LAMP1P11279 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LAMP1P11279 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
LAMP1P11279 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
LAMP1P11279 HBZP1-201ENST00000354915 429 ntBASIC16.82■□□□□ 0.28
LAMP1P11279 RNF152P1-201ENST00000397754 604 ntBASIC16.82■□□□□ 0.28
LAMP1P11279 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.82■□□□□ 0.28
LAMP1P11279 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.82■□□□□ 0.28
LAMP1P11279 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LAMP1P11279 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.82■□□□□ 0.28
LAMP1P11279 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.82■□□□□ 0.28
LAMP1P11279 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.82■□□□□ 0.28
LAMP1P11279 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.82■□□□□ 0.28
LAMP1P11279 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.82■□□□□ 0.28
LAMP1P11279 AC006011.2-201ENST00000621313 1158 ntBASIC16.82■□□□□ 0.28
LAMP1P11279 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LAMP1P11279 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LAMP1P11279 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.82■□□□□ 0.28
LAMP1P11279 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.82■□□□□ 0.28
LAMP1P11279 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LAMP1P11279 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LAMP1P11279 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
LAMP1P11279 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LAMP1P11279 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms