Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AP000867.4-201ENST00000641616 219 ntBASIC16.74■□□□□ 0.27
RAB40ALP0C0E4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAB40ALP0C0E4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAB40ALP0C0E4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB40ALP0C0E4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
RAB40ALP0C0E4 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB40ALP0C0E4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAB40ALP0C0E4 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
RAB40ALP0C0E4 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.74■□□□□ 0.27
RAB40ALP0C0E4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAB40ALP0C0E4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.73■□□□□ 0.27
RAB40ALP0C0E4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.73■□□□□ 0.27
RAB40ALP0C0E4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB40ALP0C0E4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
RAB40ALP0C0E4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAB40ALP0C0E4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB40ALP0C0E4 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.73■□□□□ 0.27
RAB40ALP0C0E4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RAB40ALP0C0E4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB40ALP0C0E4 NOC2LP2-201ENST00000407594 1944 ntBASIC16.73■□□□□ 0.27
RAB40ALP0C0E4 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB40ALP0C0E4 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
RAB40ALP0C0E4 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB40ALP0C0E4 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.73■□□□□ 0.27
RAB40ALP0C0E4 KRT18P58-201ENST00000527480 1120 ntBASIC16.73■□□□□ 0.27
RAB40ALP0C0E4 SLC25A1P1-201ENST00000528351 927 ntBASIC16.73■□□□□ 0.27
RAB40ALP0C0E4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.73■□□□□ 0.27
RAB40ALP0C0E4 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.73■□□□□ 0.27
RAB40ALP0C0E4 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAB40ALP0C0E4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.73■□□□□ 0.27
RAB40ALP0C0E4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RAB40ALP0C0E4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAB40ALP0C0E4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAB40ALP0C0E4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAB40ALP0C0E4 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB40ALP0C0E4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAB40ALP0C0E4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAB40ALP0C0E4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB40ALP0C0E4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RAB40ALP0C0E4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB40ALP0C0E4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
RAB40ALP0C0E4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
RAB40ALP0C0E4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.73■□□□□ 0.27
RAB40ALP0C0E4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB40ALP0C0E4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB40ALP0C0E4 AC018470.1-201ENST00000624790 3129 ntBASIC16.72■□□□□ 0.27
RAB40ALP0C0E4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB40ALP0C0E4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RAB40ALP0C0E4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RAB40ALP0C0E4 AC126763.1-201ENST00000552015 2118 ntBASIC16.72■□□□□ 0.27
RAB40ALP0C0E4 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB40ALP0C0E4 NOC2LP1-202ENST00000452600 2235 ntBASIC16.72■□□□□ 0.27
RAB40ALP0C0E4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB40ALP0C0E4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RAB40ALP0C0E4 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RAB40ALP0C0E4 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB40ALP0C0E4 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB40ALP0C0E4 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RAB40ALP0C0E4 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
RAB40ALP0C0E4 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.72■□□□□ 0.27
RAB40ALP0C0E4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RAB40ALP0C0E4 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.72■□□□□ 0.27
RAB40ALP0C0E4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RAB40ALP0C0E4 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.72■□□□□ 0.27
RAB40ALP0C0E4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.72■□□□□ 0.27
RAB40ALP0C0E4 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB40ALP0C0E4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.72■□□□□ 0.27
RAB40ALP0C0E4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.72■□□□□ 0.27
RAB40ALP0C0E4 AL049840.3-201ENST00000602669 611 ntBASIC16.72■□□□□ 0.27
RAB40ALP0C0E4 GPALPP1-207ENST00000611650 899 ntBASIC16.72■□□□□ 0.27
RAB40ALP0C0E4 AC116407.3-201ENST00000623905 1129 ntBASIC16.72■□□□□ 0.27
RAB40ALP0C0E4 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB40ALP0C0E4 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB40ALP0C0E4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.72■□□□□ 0.27
RAB40ALP0C0E4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.72■□□□□ 0.27
RAB40ALP0C0E4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.72■□□□□ 0.27
RAB40ALP0C0E4 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.72■□□□□ 0.27
RAB40ALP0C0E4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB40ALP0C0E4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RAB40ALP0C0E4 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB40ALP0C0E4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB40ALP0C0E4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
RAB40ALP0C0E4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
RAB40ALP0C0E4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RAB40ALP0C0E4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
RAB40ALP0C0E4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB40ALP0C0E4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
RAB40ALP0C0E4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RAB40ALP0C0E4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
RAB40ALP0C0E4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB40ALP0C0E4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
RAB40ALP0C0E4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB40ALP0C0E4 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RAB40ALP0C0E4 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RAB40ALP0C0E4 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB40ALP0C0E4 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.71■□□□□ 0.27
RAB40ALP0C0E4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RAB40ALP0C0E4 RPL13AP23-201ENST00000480739 586 ntBASIC16.71■□□□□ 0.27
RAB40ALP0C0E4 OR7E14P-202ENST00000530490 1290 ntBASIC16.71■□□□□ 0.27
RAB40ALP0C0E4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms