Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIST1H2ABP04908 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.23■□□□□ 0.19
HIST1H2ABP04908 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIST1H2ABP04908 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
HIST1H2ABP04908 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HIST1H2ABP04908 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.23■□□□□ 0.19
HIST1H2ABP04908 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
HIST1H2ABP04908 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.23■□□□□ 0.19
HIST1H2ABP04908 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
HIST1H2ABP04908 KRT18P48-201ENST00000434763 852 ntBASIC16.23■□□□□ 0.19
HIST1H2ABP04908 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.23■□□□□ 0.19
HIST1H2ABP04908 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.23■□□□□ 0.19
HIST1H2ABP04908 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
HIST1H2ABP04908 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
HIST1H2ABP04908 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIST1H2ABP04908 AL136038.4-201ENST00000603606 1261 ntBASIC16.23■□□□□ 0.19
HIST1H2ABP04908 AC011558.1-201ENST00000623459 338 ntBASIC16.23■□□□□ 0.19
HIST1H2ABP04908 AC097493.4-201ENST00000641197 219 ntBASIC16.23■□□□□ 0.19
HIST1H2ABP04908 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIST1H2ABP04908 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HIST1H2ABP04908 AL391807.1-203ENST00000604392 2365 ntBASIC16.23■□□□□ 0.19
HIST1H2ABP04908 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
HIST1H2ABP04908 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIST1H2ABP04908 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIST1H2ABP04908 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HIST1H2ABP04908 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
HIST1H2ABP04908 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
HIST1H2ABP04908 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HIST1H2ABP04908 KRT89P-201ENST00000620027 1478 ntBASIC16.22■□□□□ 0.19
HIST1H2ABP04908 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
HIST1H2ABP04908 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST1H2ABP04908 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HIST1H2ABP04908 LINC00896-202ENST00000609602 2128 ntBASIC16.22■□□□□ 0.19
HIST1H2ABP04908 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
HIST1H2ABP04908 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST1H2ABP04908 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
HIST1H2ABP04908 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.22■□□□□ 0.19
HIST1H2ABP04908 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HIST1H2ABP04908 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST1H2ABP04908 AC106820.2-201ENST00000563775 3264 ntBASIC16.22■□□□□ 0.19
HIST1H2ABP04908 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST1H2ABP04908 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST1H2ABP04908 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST1H2ABP04908 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.22■□□□□ 0.19
HIST1H2ABP04908 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HIST1H2ABP04908 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HIST1H2ABP04908 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HIST1H2ABP04908 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST1H2ABP04908 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.22■□□□□ 0.19
HIST1H2ABP04908 AL441883.1-201ENST00000566170 1045 ntBASIC16.22■□□□□ 0.19
HIST1H2ABP04908 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.22■□□□□ 0.19
HIST1H2ABP04908 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.22■□□□□ 0.19
HIST1H2ABP04908 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
HIST1H2ABP04908 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.22■□□□□ 0.19
HIST1H2ABP04908 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST1H2ABP04908 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HIST1H2ABP04908 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HIST1H2ABP04908 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HIST1H2ABP04908 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST1H2ABP04908 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST1H2ABP04908 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST1H2ABP04908 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST1H2ABP04908 AC006116.8-202ENST00000587620 1550 ntBASIC16.21■□□□□ 0.19
HIST1H2ABP04908 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.21■□□□□ 0.19
HIST1H2ABP04908 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIST1H2ABP04908 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
HIST1H2ABP04908 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.21■□□□□ 0.19
HIST1H2ABP04908 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
HIST1H2ABP04908 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HIST1H2ABP04908 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HIST1H2ABP04908 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.21■□□□□ 0.19
HIST1H2ABP04908 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
HIST1H2ABP04908 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.21■□□□□ 0.19
HIST1H2ABP04908 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.21■□□□□ 0.19
HIST1H2ABP04908 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIST1H2ABP04908 TERF1P1-201ENST00000311003 1181 ntBASIC16.21■□□□□ 0.19
HIST1H2ABP04908 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HIST1H2ABP04908 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIST1H2ABP04908 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIST1H2ABP04908 STARP1-201ENST00000397973 869 ntBASIC16.21■□□□□ 0.19
HIST1H2ABP04908 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.21■□□□□ 0.19
HIST1H2ABP04908 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.21■□□□□ 0.19
HIST1H2ABP04908 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.21■□□□□ 0.19
HIST1H2ABP04908 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.21■□□□□ 0.19
HIST1H2ABP04908 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.21■□□□□ 0.19
HIST1H2ABP04908 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HIST1H2ABP04908 AC139887.4-201ENST00000607877 719 ntBASIC16.21■□□□□ 0.19
HIST1H2ABP04908 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
HIST1H2ABP04908 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
HIST1H2ABP04908 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
HIST1H2ABP04908 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIST1H2ABP04908 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
HIST1H2ABP04908 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIST1H2ABP04908 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.21■□□□□ 0.19
HIST1H2ABP04908 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.21■□□□□ 0.19
HIST1H2ABP04908 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HIST1H2ABP04908 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
HIST1H2ABP04908 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.21■□□□□ 0.18
HIST1H2ABP04908 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HIST1H2ABP04908 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms