Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PDGFAP04085 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.62■□□□□ 0.25
PDGFAP04085 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFAP04085 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFAP04085 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
PDGFAP04085 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFAP04085 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFAP04085 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFAP04085 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.62■□□□□ 0.25
PDGFAP04085 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.62■□□□□ 0.25
PDGFAP04085 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFAP04085 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PDGFAP04085 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.62■□□□□ 0.25
PDGFAP04085 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.62■□□□□ 0.25
PDGFAP04085 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFAP04085 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFAP04085 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFAP04085 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFAP04085 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PDGFAP04085 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFAP04085 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PDGFAP04085 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
PDGFAP04085 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFAP04085 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
PDGFAP04085 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFAP04085 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFAP04085 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
PDGFAP04085 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFAP04085 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFAP04085 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
PDGFAP04085 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.61■□□□□ 0.25
PDGFAP04085 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFAP04085 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.61■□□□□ 0.25
PDGFAP04085 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.61■□□□□ 0.25
PDGFAP04085 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PDGFAP04085 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.61■□□□□ 0.25
PDGFAP04085 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFAP04085 RPS2P1-201ENST00000434010 821 ntBASIC16.61■□□□□ 0.25
PDGFAP04085 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.61■□□□□ 0.25
PDGFAP04085 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.61■□□□□ 0.25
PDGFAP04085 AC145285.3-201ENST00000564603 959 ntBASIC16.61■□□□□ 0.25
PDGFAP04085 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFAP04085 AL138831.2-201ENST00000606564 490 ntBASIC16.61■□□□□ 0.25
PDGFAP04085 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.61■□□□□ 0.25
PDGFAP04085 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.61■□□□□ 0.25
PDGFAP04085 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.61■□□□□ 0.25
PDGFAP04085 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFAP04085 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
PDGFAP04085 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFAP04085 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFAP04085 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFAP04085 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.61■□□□□ 0.25
PDGFAP04085 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.61■□□□□ 0.25
PDGFAP04085 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.61■□□□□ 0.25
PDGFAP04085 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFAP04085 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFAP04085 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PDGFAP04085 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFAP04085 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFAP04085 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFAP04085 AC009102.3-201ENST00000623118 1491 ntBASIC16.61■□□□□ 0.25
PDGFAP04085 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFAP04085 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
PDGFAP04085 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFAP04085 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFAP04085 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.6■□□□□ 0.25
PDGFAP04085 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.6■□□□□ 0.25
PDGFAP04085 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
PDGFAP04085 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFAP04085 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFAP04085 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFAP04085 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFAP04085 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFAP04085 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFAP04085 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFAP04085 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.6■□□□□ 0.25
PDGFAP04085 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFAP04085 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.6■□□□□ 0.25
PDGFAP04085 AC009533.2-201ENST00000543664 586 ntBASIC16.6■□□□□ 0.25
PDGFAP04085 AC012640.2-201ENST00000561606 901 ntBASIC16.6■□□□□ 0.25
PDGFAP04085 AL356488.2-201ENST00000602755 427 ntBASIC16.6■□□□□ 0.25
PDGFAP04085 AC140113.2-201ENST00000604370 208 ntBASIC16.6■□□□□ 0.25
PDGFAP04085 AL691403.2-201ENST00000618460 490 ntBASIC16.6■□□□□ 0.25
PDGFAP04085 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
PDGFAP04085 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.6■□□□□ 0.25
PDGFAP04085 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFAP04085 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.6■□□□□ 0.25
PDGFAP04085 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFAP04085 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFAP04085 AP005117.1-201ENST00000584346 1413 ntBASIC16.6■□□□□ 0.25
PDGFAP04085 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
PDGFAP04085 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFAP04085 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFAP04085 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFAP04085 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
PDGFAP04085 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.6■□□□□ 0.25
PDGFAP04085 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDGFAP04085 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PDGFAP04085 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDGFAP04085 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms