Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MT-CO1P00395 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MT-CO1P00395 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
MT-CO1P00395 TP73-AS1-210ENST00000637775 1455 ntBASIC18.21■□□□□ 0.51
MT-CO1P00395 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MT-CO1P00395 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MT-CO1P00395 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.21■□□□□ 0.51
MT-CO1P00395 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.21■□□□□ 0.51
MT-CO1P00395 KRT8P47-201ENST00000604727 1398 ntBASIC18.21■□□□□ 0.51
MT-CO1P00395 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MT-CO1P00395 RCN1P2-201ENST00000398357 915 ntBASIC18.21■□□□□ 0.51
MT-CO1P00395 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.21■□□□□ 0.51
MT-CO1P00395 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.21■□□□□ 0.51
MT-CO1P00395 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.21■□□□□ 0.51
MT-CO1P00395 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
MT-CO1P00395 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MT-CO1P00395 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MT-CO1P00395 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.21■□□□□ 0.51
MT-CO1P00395 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.21■□□□□ 0.51
MT-CO1P00395 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
MT-CO1P00395 AC100803.2-201ENST00000562459 1963 ntBASIC18.21■□□□□ 0.5
MT-CO1P00395 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MT-CO1P00395 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MT-CO1P00395 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MT-CO1P00395 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.2■□□□□ 0.5
MT-CO1P00395 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MT-CO1P00395 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.2■□□□□ 0.5
MT-CO1P00395 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
MT-CO1P00395 NOC2LP2-201ENST00000407594 1944 ntBASIC18.2■□□□□ 0.5
MT-CO1P00395 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MT-CO1P00395 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.2■□□□□ 0.5
MT-CO1P00395 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MT-CO1P00395 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MT-CO1P00395 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
MT-CO1P00395 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.2■□□□□ 0.5
MT-CO1P00395 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
MT-CO1P00395 POM121L3P-201ENST00000419331 1163 ntBASIC18.2■□□□□ 0.5
MT-CO1P00395 KRT16P4-201ENST00000453883 522 ntBASIC18.2■□□□□ 0.5
MT-CO1P00395 EMBP1-201ENST00000458200 901 ntBASIC18.2■□□□□ 0.5
MT-CO1P00395 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.2■□□□□ 0.5
MT-CO1P00395 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.2■□□□□ 0.5
MT-CO1P00395 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.2■□□□□ 0.5
MT-CO1P00395 AC111152.3-201ENST00000569699 673 ntBASIC18.2■□□□□ 0.5
MT-CO1P00395 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MT-CO1P00395 MIR5100-201ENST00000579544 119 ntBASIC18.2■□□□□ 0.5
MT-CO1P00395 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.2■□□□□ 0.5
MT-CO1P00395 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.2■□□□□ 0.5
MT-CO1P00395 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
MT-CO1P00395 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.2■□□□□ 0.5
MT-CO1P00395 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MT-CO1P00395 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
MT-CO1P00395 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MT-CO1P00395 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MT-CO1P00395 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MT-CO1P00395 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MT-CO1P00395 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MT-CO1P00395 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.2■□□□□ 0.5
MT-CO1P00395 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MT-CO1P00395 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MT-CO1P00395 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.2■□□□□ 0.5
MT-CO1P00395 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MT-CO1P00395 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
MT-CO1P00395 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-CO1P00395 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-CO1P00395 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-CO1P00395 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-CO1P00395 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.19■□□□□ 0.5
MT-CO1P00395 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-CO1P00395 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-CO1P00395 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MT-CO1P00395 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.19■□□□□ 0.5
MT-CO1P00395 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-CO1P00395 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-CO1P00395 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.19■□□□□ 0.5
MT-CO1P00395 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.19■□□□□ 0.5
MT-CO1P00395 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MT-CO1P00395 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-CO1P00395 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.19■□□□□ 0.5
MT-CO1P00395 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
MT-CO1P00395 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.19■□□□□ 0.5
MT-CO1P00395 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.19■□□□□ 0.5
MT-CO1P00395 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.19■□□□□ 0.5
MT-CO1P00395 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.19■□□□□ 0.5
MT-CO1P00395 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.19■□□□□ 0.5
MT-CO1P00395 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-CO1P00395 AL691432.3-201ENST00000621860 400 ntBASIC18.19■□□□□ 0.5
MT-CO1P00395 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-CO1P00395 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MT-CO1P00395 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.19■□□□□ 0.5
MT-CO1P00395 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-CO1P00395 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-CO1P00395 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.19■□□□□ 0.5
MT-CO1P00395 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-CO1P00395 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MT-CO1P00395 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.18■□□□□ 0.5
MT-CO1P00395 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.18■□□□□ 0.5
MT-CO1P00395 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
MT-CO1P00395 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MT-CO1P00395 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.18■□□□□ 0.5
MT-CO1P00395 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms