Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRUB2O95900 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRUB2O95900 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRUB2O95900 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.61■□□□□ 0.57
TRUB2O95900 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TRUB2O95900 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRUB2O95900 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRUB2O95900 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TRUB2O95900 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRUB2O95900 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TRUB2O95900 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.61■□□□□ 0.57
TRUB2O95900 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.61■□□□□ 0.57
TRUB2O95900 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRUB2O95900 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
TRUB2O95900 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.61■□□□□ 0.57
TRUB2O95900 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRUB2O95900 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
TRUB2O95900 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TRUB2O95900 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TRUB2O95900 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TRUB2O95900 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.6■□□□□ 0.57
TRUB2O95900 NSUN5P1-202ENST00000421140 1535 ntBASIC18.6■□□□□ 0.57
TRUB2O95900 NSUN5P2-203ENST00000457352 1529 ntBASIC18.6■□□□□ 0.57
TRUB2O95900 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRUB2O95900 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
TRUB2O95900 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.6■□□□□ 0.57
TRUB2O95900 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRUB2O95900 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRUB2O95900 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRUB2O95900 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.6■□□□□ 0.57
TRUB2O95900 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRUB2O95900 AC125634.1-201ENST00000438758 1403 ntBASIC18.6■□□□□ 0.57
TRUB2O95900 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.6■□□□□ 0.57
TRUB2O95900 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRUB2O95900 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRUB2O95900 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRUB2O95900 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TRUB2O95900 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
TRUB2O95900 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TRUB2O95900 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.6■□□□□ 0.57
TRUB2O95900 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.6■□□□□ 0.57
TRUB2O95900 MIR3652-201ENST00000579335 131 ntBASIC18.6■□□□□ 0.57
TRUB2O95900 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRUB2O95900 AL138831.2-201ENST00000606564 490 ntBASIC18.6■□□□□ 0.57
TRUB2O95900 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRUB2O95900 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRUB2O95900 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRUB2O95900 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TRUB2O95900 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.6■□□□□ 0.57
TRUB2O95900 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRUB2O95900 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TRUB2O95900 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRUB2O95900 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRUB2O95900 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TRUB2O95900 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRUB2O95900 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRUB2O95900 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.59■□□□□ 0.57
TRUB2O95900 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
TRUB2O95900 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.59■□□□□ 0.57
TRUB2O95900 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRUB2O95900 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TRUB2O95900 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
TRUB2O95900 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.59■□□□□ 0.57
TRUB2O95900 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.59■□□□□ 0.57
TRUB2O95900 MINOS1P3-201ENST00000457048 203 ntBASIC18.59■□□□□ 0.57
TRUB2O95900 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.59■□□□□ 0.57
TRUB2O95900 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.59■□□□□ 0.57
TRUB2O95900 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.59■□□□□ 0.57
TRUB2O95900 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.59■□□□□ 0.57
TRUB2O95900 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRUB2O95900 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
TRUB2O95900 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRUB2O95900 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRUB2O95900 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
TRUB2O95900 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRUB2O95900 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRUB2O95900 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRUB2O95900 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TRUB2O95900 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRUB2O95900 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
TRUB2O95900 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.58■□□□□ 0.57
TRUB2O95900 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRUB2O95900 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRUB2O95900 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRUB2O95900 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
TRUB2O95900 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.58■□□□□ 0.57
TRUB2O95900 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRUB2O95900 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.58■□□□□ 0.57
TRUB2O95900 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRUB2O95900 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.58■□□□□ 0.57
TRUB2O95900 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRUB2O95900 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRUB2O95900 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRUB2O95900 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRUB2O95900 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.58■□□□□ 0.56
TRUB2O95900 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRUB2O95900 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRUB2O95900 DDX43P3-201ENST00000441064 443 ntBASIC18.58■□□□□ 0.56
TRUB2O95900 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRUB2O95900 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms