Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.96■□□□□ 0.15
UBL3O95164 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.96■□□□□ 0.15
UBL3O95164 HLA-F-220ENST00000434407 884 ntBASIC15.96■□□□□ 0.15
UBL3O95164 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.96■□□□□ 0.15
UBL3O95164 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.96■□□□□ 0.15
UBL3O95164 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
UBL3O95164 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.96■□□□□ 0.15
UBL3O95164 AC024563.2-201ENST00000603282 481 ntBASIC15.96■□□□□ 0.15
UBL3O95164 AC079602.3-201ENST00000623931 403 ntBASIC15.96■□□□□ 0.15
UBL3O95164 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.96■□□□□ 0.15
UBL3O95164 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
UBL3O95164 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
UBL3O95164 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
UBL3O95164 AL023806.1-201ENST00000603994 1649 ntBASIC15.96■□□□□ 0.15
UBL3O95164 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.96■□□□□ 0.15
UBL3O95164 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
UBL3O95164 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
UBL3O95164 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
UBL3O95164 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
UBL3O95164 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
UBL3O95164 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
UBL3O95164 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.96■□□□□ 0.14
UBL3O95164 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.96■□□□□ 0.14
UBL3O95164 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
UBL3O95164 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
UBL3O95164 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
UBL3O95164 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
UBL3O95164 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.95■□□□□ 0.14
UBL3O95164 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.95■□□□□ 0.14
UBL3O95164 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.95■□□□□ 0.14
UBL3O95164 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.95■□□□□ 0.14
UBL3O95164 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
UBL3O95164 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
UBL3O95164 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
UBL3O95164 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
UBL3O95164 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.95■□□□□ 0.14
UBL3O95164 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.95■□□□□ 0.14
UBL3O95164 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
UBL3O95164 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
UBL3O95164 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
UBL3O95164 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.95■□□□□ 0.14
UBL3O95164 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.95■□□□□ 0.14
UBL3O95164 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.95■□□□□ 0.14
UBL3O95164 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
UBL3O95164 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.95■□□□□ 0.14
UBL3O95164 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.95■□□□□ 0.14
UBL3O95164 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.95■□□□□ 0.14
UBL3O95164 NTF6B-201ENST00000591913 560 ntBASIC15.95■□□□□ 0.14
UBL3O95164 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.95■□□□□ 0.14
UBL3O95164 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.95■□□□□ 0.14
UBL3O95164 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.95■□□□□ 0.14
UBL3O95164 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.95■□□□□ 0.14
UBL3O95164 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
UBL3O95164 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
UBL3O95164 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
UBL3O95164 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
UBL3O95164 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
UBL3O95164 NKILA-202ENST00000614771 2598 ntBASIC15.95■□□□□ 0.14
UBL3O95164 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
UBL3O95164 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
UBL3O95164 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
UBL3O95164 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
UBL3O95164 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
UBL3O95164 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
UBL3O95164 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.95■□□□□ 0.14
UBL3O95164 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
UBL3O95164 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.95■□□□□ 0.14
UBL3O95164 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.94■□□□□ 0.14
UBL3O95164 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
UBL3O95164 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
UBL3O95164 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
UBL3O95164 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.94■□□□□ 0.14
UBL3O95164 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.94■□□□□ 0.14
UBL3O95164 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
UBL3O95164 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
UBL3O95164 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
UBL3O95164 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.94■□□□□ 0.14
UBL3O95164 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.94■□□□□ 0.14
UBL3O95164 KRT18P48-201ENST00000434763 852 ntBASIC15.94■□□□□ 0.14
UBL3O95164 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.94■□□□□ 0.14
UBL3O95164 AC092597.1-201ENST00000487352 616 ntBASIC15.94■□□□□ 0.14
UBL3O95164 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.94■□□□□ 0.14
UBL3O95164 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.94■□□□□ 0.14
UBL3O95164 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.94■□□□□ 0.14
UBL3O95164 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.94■□□□□ 0.14
UBL3O95164 ZNF444P1-201ENST00000559497 298 ntBASIC15.94■□□□□ 0.14
UBL3O95164 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.94■□□□□ 0.14
UBL3O95164 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.94■□□□□ 0.14
UBL3O95164 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.94■□□□□ 0.14
UBL3O95164 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
UBL3O95164 KRT89P-201ENST00000620027 1478 ntBASIC15.94■□□□□ 0.14
UBL3O95164 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
UBL3O95164 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
UBL3O95164 AL024508.2-201ENST00000607749 1894 ntBASIC15.94■□□□□ 0.14
UBL3O95164 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
UBL3O95164 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
UBL3O95164 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
UBL3O95164 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
UBL3O95164 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
UBL3O95164 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms