Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLPXO76031 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLPXO76031 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLPXO76031 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLPXO76031 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLPXO76031 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CLPXO76031 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLPXO76031 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLPXO76031 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLPXO76031 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLPXO76031 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.17■□□□□ 0.18
CLPXO76031 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLPXO76031 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.17■□□□□ 0.18
CLPXO76031 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLPXO76031 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.17■□□□□ 0.18
CLPXO76031 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLPXO76031 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.17■□□□□ 0.18
CLPXO76031 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.17■□□□□ 0.18
CLPXO76031 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.17■□□□□ 0.18
CLPXO76031 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLPXO76031 RN7SL471P-201ENST00000580476 299 ntBASIC16.17■□□□□ 0.18
CLPXO76031 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLPXO76031 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CLPXO76031 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLPXO76031 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.17■□□□□ 0.18
CLPXO76031 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLPXO76031 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLPXO76031 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLPXO76031 AC132872.4-202ENST00000622924 2756 ntBASIC16.17■□□□□ 0.18
CLPXO76031 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLPXO76031 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CLPXO76031 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLPXO76031 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLPXO76031 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CLPXO76031 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.17■□□□□ 0.18
CLPXO76031 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLPXO76031 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLPXO76031 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLPXO76031 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLPXO76031 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLPXO76031 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLPXO76031 AP006587.1-201ENST00000534129 1502 ntBASIC16.16■□□□□ 0.18
CLPXO76031 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.16■□□□□ 0.18
CLPXO76031 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLPXO76031 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CLPXO76031 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.16■□□□□ 0.18
CLPXO76031 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CLPXO76031 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLPXO76031 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CLPXO76031 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.16■□□□□ 0.18
CLPXO76031 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.16■□□□□ 0.18
CLPXO76031 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLPXO76031 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
CLPXO76031 C1QBPP2-201ENST00000528754 825 ntBASIC16.16■□□□□ 0.18
CLPXO76031 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.16■□□□□ 0.18
CLPXO76031 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLPXO76031 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.16■□□□□ 0.18
CLPXO76031 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLPXO76031 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.16■□□□□ 0.18
CLPXO76031 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CLPXO76031 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLPXO76031 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLPXO76031 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.16■□□□□ 0.18
CLPXO76031 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
CLPXO76031 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLPXO76031 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLPXO76031 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.16■□□□□ 0.18
CLPXO76031 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLPXO76031 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLPXO76031 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLPXO76031 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLPXO76031 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLPXO76031 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLPXO76031 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLPXO76031 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.15■□□□□ 0.18
CLPXO76031 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLPXO76031 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CLPXO76031 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.15■□□□□ 0.18
CLPXO76031 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLPXO76031 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
CLPXO76031 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLPXO76031 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLPXO76031 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.15■□□□□ 0.18
CLPXO76031 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLPXO76031 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLPXO76031 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CLPXO76031 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
CLPXO76031 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CLPXO76031 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLPXO76031 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.15■□□□□ 0.18
CLPXO76031 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.15■□□□□ 0.18
CLPXO76031 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLPXO76031 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.15■□□□□ 0.18
CLPXO76031 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.15■□□□□ 0.18
CLPXO76031 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLPXO76031 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.15■□□□□ 0.18
CLPXO76031 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.15■□□□□ 0.18
CLPXO76031 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLPXO76031 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.15■□□□□ 0.18
CLPXO76031 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms