Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NDUFS3O75489 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.73■□□□□ 0.43
NDUFS3O75489 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NDUFS3O75489 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NDUFS3O75489 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
NDUFS3O75489 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NDUFS3O75489 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NDUFS3O75489 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.73■□□□□ 0.43
NDUFS3O75489 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NDUFS3O75489 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NDUFS3O75489 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NDUFS3O75489 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
NDUFS3O75489 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NDUFS3O75489 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.73■□□□□ 0.43
NDUFS3O75489 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NDUFS3O75489 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NDUFS3O75489 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NDUFS3O75489 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.73■□□□□ 0.43
NDUFS3O75489 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.73■□□□□ 0.43
NDUFS3O75489 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.73■□□□□ 0.43
NDUFS3O75489 AL136038.3-201ENST00000561909 1096 ntBASIC17.73■□□□□ 0.43
NDUFS3O75489 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.73■□□□□ 0.43
NDUFS3O75489 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.73■□□□□ 0.43
NDUFS3O75489 NTF6B-201ENST00000591913 560 ntBASIC17.73■□□□□ 0.43
NDUFS3O75489 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NDUFS3O75489 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NDUFS3O75489 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
NDUFS3O75489 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NDUFS3O75489 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
NDUFS3O75489 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.73■□□□□ 0.43
NDUFS3O75489 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
NDUFS3O75489 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.73■□□□□ 0.43
NDUFS3O75489 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
NDUFS3O75489 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NDUFS3O75489 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.73■□□□□ 0.43
NDUFS3O75489 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
NDUFS3O75489 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NDUFS3O75489 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NDUFS3O75489 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
NDUFS3O75489 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NDUFS3O75489 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDUFS3O75489 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDUFS3O75489 AL355312.1-201ENST00000407115 2176 ntBASIC17.72■□□□□ 0.43
NDUFS3O75489 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.72■□□□□ 0.43
NDUFS3O75489 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDUFS3O75489 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.72■□□□□ 0.43
NDUFS3O75489 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDUFS3O75489 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDUFS3O75489 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
NDUFS3O75489 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.72■□□□□ 0.43
NDUFS3O75489 TSPY22P-201ENST00000427496 604 ntBASIC17.72■□□□□ 0.43
NDUFS3O75489 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.72■□□□□ 0.43
NDUFS3O75489 DDX43P3-201ENST00000441064 443 ntBASIC17.72■□□□□ 0.43
NDUFS3O75489 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NDUFS3O75489 GUSBP12-201ENST00000513727 720 ntBASIC17.72■□□□□ 0.43
NDUFS3O75489 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
NDUFS3O75489 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NDUFS3O75489 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.72■□□□□ 0.43
NDUFS3O75489 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDUFS3O75489 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
NDUFS3O75489 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.72■□□□□ 0.43
NDUFS3O75489 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NDUFS3O75489 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NDUFS3O75489 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NDUFS3O75489 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
NDUFS3O75489 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
NDUFS3O75489 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.71■□□□□ 0.43
NDUFS3O75489 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.71■□□□□ 0.43
NDUFS3O75489 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.71■□□□□ 0.43
NDUFS3O75489 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDUFS3O75489 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
NDUFS3O75489 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDUFS3O75489 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDUFS3O75489 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDUFS3O75489 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NDUFS3O75489 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.71■□□□□ 0.43
NDUFS3O75489 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NDUFS3O75489 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDUFS3O75489 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDUFS3O75489 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDUFS3O75489 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.71■□□□□ 0.43
NDUFS3O75489 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.71■□□□□ 0.43
NDUFS3O75489 AL031133.1-201ENST00000406807 723 ntBASIC17.71■□□□□ 0.43
NDUFS3O75489 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NDUFS3O75489 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.71■□□□□ 0.43
NDUFS3O75489 AC011498.5-201ENST00000592027 486 ntBASIC17.71■□□□□ 0.43
NDUFS3O75489 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDUFS3O75489 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.71■□□□□ 0.43
NDUFS3O75489 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.71■□□□□ 0.43
NDUFS3O75489 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
NDUFS3O75489 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.71■□□□□ 0.43
NDUFS3O75489 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDUFS3O75489 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.71■□□□□ 0.43
NDUFS3O75489 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDUFS3O75489 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
NDUFS3O75489 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDUFS3O75489 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.71■□□□□ 0.43
NDUFS3O75489 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDUFS3O75489 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDUFS3O75489 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms