Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AC096582.2-201ENST00000510860 516 ntBASIC20.42■□□□□ 0.86
PRPF3O43395 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.42■□□□□ 0.86
PRPF3O43395 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.42■□□□□ 0.86
PRPF3O43395 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.42■□□□□ 0.86
PRPF3O43395 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRPF3O43395 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.42■□□□□ 0.86
PRPF3O43395 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.42■□□□□ 0.86
PRPF3O43395 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.42■□□□□ 0.86
PRPF3O43395 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRPF3O43395 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PRPF3O43395 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
PRPF3O43395 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PRPF3O43395 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PRPF3O43395 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRPF3O43395 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PRPF3O43395 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRPF3O43395 AL049757.1-201ENST00000616842 1596 ntBASIC20.42■□□□□ 0.86
PRPF3O43395 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRPF3O43395 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PRPF3O43395 SIRPAP1-201ENST00000448467 1770 ntBASIC20.41■□□□□ 0.86
PRPF3O43395 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
PRPF3O43395 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
PRPF3O43395 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRPF3O43395 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.41■□□□□ 0.86
PRPF3O43395 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
PRPF3O43395 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.41■□□□□ 0.86
PRPF3O43395 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRPF3O43395 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PRPF3O43395 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.41■□□□□ 0.86
PRPF3O43395 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.41■□□□□ 0.86
PRPF3O43395 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.41■□□□□ 0.86
PRPF3O43395 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.41■□□□□ 0.86
PRPF3O43395 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.41■□□□□ 0.86
PRPF3O43395 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.41■□□□□ 0.86
PRPF3O43395 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PRPF3O43395 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRPF3O43395 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PRPF3O43395 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRPF3O43395 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PRPF3O43395 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRPF3O43395 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRPF3O43395 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.41■□□□□ 0.86
PRPF3O43395 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRPF3O43395 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRPF3O43395 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRPF3O43395 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.4■□□□□ 0.86
PRPF3O43395 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.4■□□□□ 0.86
PRPF3O43395 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRPF3O43395 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.4■□□□□ 0.86
PRPF3O43395 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRPF3O43395 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PRPF3O43395 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRPF3O43395 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRPF3O43395 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PRPF3O43395 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
PRPF3O43395 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRPF3O43395 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.4■□□□□ 0.86
PRPF3O43395 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.4■□□□□ 0.86
PRPF3O43395 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.4■□□□□ 0.86
PRPF3O43395 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.4■□□□□ 0.86
PRPF3O43395 MIR5100-201ENST00000579544 119 ntBASIC20.4■□□□□ 0.86
PRPF3O43395 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.4■□□□□ 0.86
PRPF3O43395 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.4■□□□□ 0.86
PRPF3O43395 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.4■□□□□ 0.86
PRPF3O43395 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRPF3O43395 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
PRPF3O43395 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
PRPF3O43395 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PRPF3O43395 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.39■□□□□ 0.86
PRPF3O43395 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PRPF3O43395 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.39■□□□□ 0.86
PRPF3O43395 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PRPF3O43395 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
PRPF3O43395 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PRPF3O43395 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
PRPF3O43395 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.39■□□□□ 0.85
PRPF3O43395 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PRPF3O43395 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.39■□□□□ 0.85
PRPF3O43395 AC109462.3-201ENST00000573934 613 ntBASIC20.39■□□□□ 0.85
PRPF3O43395 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.39■□□□□ 0.85
PRPF3O43395 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
PRPF3O43395 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
PRPF3O43395 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.39■□□□□ 0.85
PRPF3O43395 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PRPF3O43395 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PRPF3O43395 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PRPF3O43395 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PRPF3O43395 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PRPF3O43395 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.39■□□□□ 0.85
PRPF3O43395 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
PRPF3O43395 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PRPF3O43395 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PRPF3O43395 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.39■□□□□ 0.85
PRPF3O43395 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRPF3O43395 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.38■□□□□ 0.85
PRPF3O43395 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.38■□□□□ 0.85
PRPF3O43395 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.38■□□□□ 0.85
PRPF3O43395 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRPF3O43395 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.38■□□□□ 0.85
PRPF3O43395 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms