Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PFDN6O15212 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PFDN6O15212 AC006116.8-202ENST00000587620 1550 ntBASIC17.83■□□□□ 0.44
PFDN6O15212 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.82■□□□□ 0.44
PFDN6O15212 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PFDN6O15212 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PFDN6O15212 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.82■□□□□ 0.44
PFDN6O15212 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PFDN6O15212 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PFDN6O15212 AL353692.3-201ENST00000407031 1396 ntBASIC17.82■□□□□ 0.44
PFDN6O15212 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PFDN6O15212 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PFDN6O15212 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PFDN6O15212 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PFDN6O15212 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PFDN6O15212 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PFDN6O15212 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.82■□□□□ 0.44
PFDN6O15212 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.82■□□□□ 0.44
PFDN6O15212 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PFDN6O15212 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PFDN6O15212 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.82■□□□□ 0.44
PFDN6O15212 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.82■□□□□ 0.44
PFDN6O15212 AC104076.2-201ENST00000448912 469 ntBASIC17.82■□□□□ 0.44
PFDN6O15212 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.82■□□□□ 0.44
PFDN6O15212 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.82■□□□□ 0.44
PFDN6O15212 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PFDN6O15212 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PFDN6O15212 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PFDN6O15212 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PFDN6O15212 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
PFDN6O15212 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PFDN6O15212 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PFDN6O15212 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PFDN6O15212 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
PFDN6O15212 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
PFDN6O15212 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PFDN6O15212 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PFDN6O15212 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PFDN6O15212 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PFDN6O15212 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PFDN6O15212 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PFDN6O15212 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PFDN6O15212 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PFDN6O15212 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PFDN6O15212 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
PFDN6O15212 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PFDN6O15212 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PFDN6O15212 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
PFDN6O15212 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PFDN6O15212 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PFDN6O15212 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.81■□□□□ 0.44
PFDN6O15212 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.81■□□□□ 0.44
PFDN6O15212 DDX43P3-201ENST00000441064 443 ntBASIC17.81■□□□□ 0.44
PFDN6O15212 KRT18P38-201ENST00000449496 1282 ntBASIC17.81■□□□□ 0.44
PFDN6O15212 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PFDN6O15212 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PFDN6O15212 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PFDN6O15212 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PFDN6O15212 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PFDN6O15212 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PFDN6O15212 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
PFDN6O15212 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PFDN6O15212 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PFDN6O15212 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PFDN6O15212 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PFDN6O15212 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.8■□□□□ 0.44
PFDN6O15212 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PFDN6O15212 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PFDN6O15212 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PFDN6O15212 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
PFDN6O15212 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PFDN6O15212 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PFDN6O15212 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PFDN6O15212 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PFDN6O15212 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.8■□□□□ 0.44
PFDN6O15212 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.8■□□□□ 0.44
PFDN6O15212 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PFDN6O15212 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
PFDN6O15212 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PFDN6O15212 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PFDN6O15212 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PFDN6O15212 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PFDN6O15212 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.8■□□□□ 0.44
PFDN6O15212 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PFDN6O15212 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PFDN6O15212 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.8■□□□□ 0.44
PFDN6O15212 AL671277.2-201ENST00000458060 996 ntBASIC17.8■□□□□ 0.44
PFDN6O15212 DUX4L26-201ENST00000489078 1255 ntBASIC17.8■□□□□ 0.44
PFDN6O15212 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.8■□□□□ 0.44
PFDN6O15212 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.8■□□□□ 0.44
PFDN6O15212 RN7SL850P-201ENST00000579959 291 ntBASIC17.8■□□□□ 0.44
PFDN6O15212 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.8■□□□□ 0.44
PFDN6O15212 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.8■□□□□ 0.44
PFDN6O15212 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.8■□□□□ 0.44
PFDN6O15212 AC012317.2-201ENST00000623305 2251 ntBASIC17.8■□□□□ 0.44
PFDN6O15212 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.8■□□□□ 0.44
PFDN6O15212 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.8■□□□□ 0.44
PFDN6O15212 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PFDN6O15212 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.8■□□□□ 0.44
PFDN6O15212 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms