Protein–RNA interactions for Protein: O00743

PPP6C, Serine/threonine-protein phosphatase 6 catalytic subunit, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6CO00743 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
PPP6CO00743 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PPP6CO00743 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PPP6CO00743 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PPP6CO00743 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PPP6CO00743 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.26■□□□□ 0.35
PPP6CO00743 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PPP6CO00743 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.26■□□□□ 0.35
PPP6CO00743 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PPP6CO00743 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PPP6CO00743 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PPP6CO00743 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PPP6CO00743 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PPP6CO00743 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PPP6CO00743 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PPP6CO00743 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
PPP6CO00743 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.26■□□□□ 0.35
PPP6CO00743 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.26■□□□□ 0.35
PPP6CO00743 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.26■□□□□ 0.35
PPP6CO00743 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PPP6CO00743 KRT18P57-201ENST00000443599 1254 ntBASIC17.26■□□□□ 0.35
PPP6CO00743 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PPP6CO00743 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.26■□□□□ 0.35
PPP6CO00743 AC112698.1-201ENST00000510299 916 ntBASIC17.26■□□□□ 0.35
PPP6CO00743 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
PPP6CO00743 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.26■□□□□ 0.35
PPP6CO00743 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.26■□□□□ 0.35
PPP6CO00743 AC009154.2-201ENST00000621177 724 ntBASIC17.26■□□□□ 0.35
PPP6CO00743 LINC01451-201ENST00000623792 534 ntBASIC17.26■□□□□ 0.35
PPP6CO00743 AC073912.3-201ENST00000624414 853 ntBASIC17.26■□□□□ 0.35
PPP6CO00743 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
PPP6CO00743 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.26■□□□□ 0.35
PPP6CO00743 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PPP6CO00743 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
PPP6CO00743 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PPP6CO00743 AC084018.2-201ENST00000613093 2607 ntBASIC17.26■□□□□ 0.35
PPP6CO00743 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PPP6CO00743 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PPP6CO00743 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PPP6CO00743 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PPP6CO00743 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PPP6CO00743 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PPP6CO00743 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PPP6CO00743 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PPP6CO00743 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PPP6CO00743 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PPP6CO00743 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.25■□□□□ 0.35
PPP6CO00743 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.25■□□□□ 0.35
PPP6CO00743 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PPP6CO00743 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PPP6CO00743 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PPP6CO00743 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PPP6CO00743 IGHGP-201ENST00000390555 1178 ntBASIC17.25■□□□□ 0.35
PPP6CO00743 TSPY12P-201ENST00000421279 868 ntBASIC17.25■□□□□ 0.35
PPP6CO00743 DDX43P3-201ENST00000441064 443 ntBASIC17.25■□□□□ 0.35
PPP6CO00743 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PPP6CO00743 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PPP6CO00743 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.25■□□□□ 0.35
PPP6CO00743 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.25■□□□□ 0.35
PPP6CO00743 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.25■□□□□ 0.35
PPP6CO00743 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.25■□□□□ 0.35
PPP6CO00743 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.25■□□□□ 0.35
PPP6CO00743 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.25■□□□□ 0.35
PPP6CO00743 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PPP6CO00743 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.25■□□□□ 0.35
PPP6CO00743 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.25■□□□□ 0.35
PPP6CO00743 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.25■□□□□ 0.35
PPP6CO00743 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PPP6CO00743 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PPP6CO00743 AC011676.5-201ENST00000624864 2660 ntBASIC17.24■□□□□ 0.35
PPP6CO00743 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PPP6CO00743 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PPP6CO00743 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PPP6CO00743 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PPP6CO00743 MIR662-201ENST00000384847 95 ntBASIC17.24■□□□□ 0.35
PPP6CO00743 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PPP6CO00743 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PPP6CO00743 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PPP6CO00743 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.24■□□□□ 0.35
PPP6CO00743 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PPP6CO00743 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.24■□□□□ 0.35
PPP6CO00743 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.24■□□□□ 0.35
PPP6CO00743 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
PPP6CO00743 HYMAI.1-201ENST00000620949 238 ntBASIC17.24■□□□□ 0.35
PPP6CO00743 AC006011.2-201ENST00000621313 1158 ntBASIC17.24■□□□□ 0.35
PPP6CO00743 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PPP6CO00743 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PPP6CO00743 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PPP6CO00743 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PPP6CO00743 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PPP6CO00743 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PPP6CO00743 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PPP6CO00743 NKILA-202ENST00000614771 2598 ntBASIC17.24■□□□□ 0.35
PPP6CO00743 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PPP6CO00743 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PPP6CO00743 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PPP6CO00743 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.23■□□□□ 0.35
PPP6CO00743 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PPP6CO00743 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.23■□□□□ 0.35
PPP6CO00743 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms