Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM38O00635 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TRIM38O00635 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM38O00635 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM38O00635 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
TRIM38O00635 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM38O00635 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM38O00635 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.9■□□□□ 0.46
TRIM38O00635 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM38O00635 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM38O00635 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM38O00635 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM38O00635 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM38O00635 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM38O00635 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM38O00635 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM38O00635 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
TRIM38O00635 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TRIM38O00635 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TRIM38O00635 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM38O00635 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.46
TRIM38O00635 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
TRIM38O00635 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM38O00635 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
TRIM38O00635 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.89■□□□□ 0.45
TRIM38O00635 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM38O00635 AC012313.1-201ENST00000593393 3059 ntBASIC17.89■□□□□ 0.45
TRIM38O00635 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM38O00635 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM38O00635 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM38O00635 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM38O00635 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM38O00635 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.89■□□□□ 0.45
TRIM38O00635 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM38O00635 NUS1P2-201ENST00000417358 873 ntBASIC17.89■□□□□ 0.45
TRIM38O00635 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM38O00635 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.89■□□□□ 0.45
TRIM38O00635 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.89■□□□□ 0.45
TRIM38O00635 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.89■□□□□ 0.45
TRIM38O00635 AL662844.1-201ENST00000546340 181 ntBASIC17.89■□□□□ 0.45
TRIM38O00635 AC009065.1-201ENST00000564055 1225 ntBASIC17.89■□□□□ 0.45
TRIM38O00635 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.89■□□□□ 0.45
TRIM38O00635 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.89■□□□□ 0.45
TRIM38O00635 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.89■□□□□ 0.45
TRIM38O00635 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM38O00635 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM38O00635 HEIH-201ENST00000623091 1652 ntBASIC17.89■□□□□ 0.45
TRIM38O00635 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM38O00635 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.89■□□□□ 0.45
TRIM38O00635 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TRIM38O00635 KRT89P-201ENST00000620027 1478 ntBASIC17.88■□□□□ 0.45
TRIM38O00635 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.88■□□□□ 0.45
TRIM38O00635 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.88■□□□□ 0.45
TRIM38O00635 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM38O00635 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM38O00635 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM38O00635 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM38O00635 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM38O00635 VENTXP7-201ENST00000475503 772 ntBASIC17.88■□□□□ 0.45
TRIM38O00635 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.88■□□□□ 0.45
TRIM38O00635 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
TRIM38O00635 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.88■□□□□ 0.45
TRIM38O00635 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
TRIM38O00635 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.88■□□□□ 0.45
TRIM38O00635 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.88■□□□□ 0.45
TRIM38O00635 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.88■□□□□ 0.45
TRIM38O00635 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TRIM38O00635 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM38O00635 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM38O00635 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM38O00635 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM38O00635 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.88■□□□□ 0.45
TRIM38O00635 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM38O00635 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM38O00635 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TRIM38O00635 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM38O00635 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
TRIM38O00635 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.87■□□□□ 0.45
TRIM38O00635 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM38O00635 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.87■□□□□ 0.45
TRIM38O00635 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM38O00635 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM38O00635 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM38O00635 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM38O00635 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
TRIM38O00635 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.87■□□□□ 0.45
TRIM38O00635 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.87■□□□□ 0.45
TRIM38O00635 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM38O00635 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.87■□□□□ 0.45
TRIM38O00635 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.87■□□□□ 0.45
TRIM38O00635 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TRIM38O00635 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM38O00635 HLA-A-201ENST00000376802 1334 ntBASIC17.87■□□□□ 0.45
TRIM38O00635 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM38O00635 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TRIM38O00635 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.87■□□□□ 0.45
TRIM38O00635 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM38O00635 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM38O00635 AL499627.1-201ENST00000569373 2188 ntBASIC17.87■□□□□ 0.45
TRIM38O00635 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms