Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 AC024563.2-201ENST00000603282 481 ntBASIC16.78■□□□□ 0.28
CLIC1O00299 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.78■□□□□ 0.28
CLIC1O00299 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLIC1O00299 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLIC1O00299 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLIC1O00299 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLIC1O00299 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.78■□□□□ 0.28
CLIC1O00299 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLIC1O00299 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLIC1O00299 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.78■□□□□ 0.28
CLIC1O00299 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLIC1O00299 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLIC1O00299 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.78■□□□□ 0.28
CLIC1O00299 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
CLIC1O00299 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CLIC1O00299 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLIC1O00299 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLIC1O00299 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLIC1O00299 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLIC1O00299 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLIC1O00299 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.77■□□□□ 0.28
CLIC1O00299 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLIC1O00299 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLIC1O00299 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLIC1O00299 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.77■□□□□ 0.28
CLIC1O00299 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLIC1O00299 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CLIC1O00299 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLIC1O00299 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLIC1O00299 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CLIC1O00299 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLIC1O00299 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.28
CLIC1O00299 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLIC1O00299 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.77■□□□□ 0.28
CLIC1O00299 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.77■□□□□ 0.28
CLIC1O00299 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.77■□□□□ 0.28
CLIC1O00299 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.77■□□□□ 0.28
CLIC1O00299 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.77■□□□□ 0.28
CLIC1O00299 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLIC1O00299 KRT89P-201ENST00000620027 1478 ntBASIC16.77■□□□□ 0.28
CLIC1O00299 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.77■□□□□ 0.27
CLIC1O00299 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.77■□□□□ 0.27
CLIC1O00299 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.77■□□□□ 0.27
CLIC1O00299 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLIC1O00299 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
CLIC1O00299 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLIC1O00299 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLIC1O00299 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLIC1O00299 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
CLIC1O00299 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLIC1O00299 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLIC1O00299 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLIC1O00299 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.76■□□□□ 0.27
CLIC1O00299 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLIC1O00299 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLIC1O00299 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLIC1O00299 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLIC1O00299 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLIC1O00299 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.76■□□□□ 0.27
CLIC1O00299 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLIC1O00299 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLIC1O00299 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLIC1O00299 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.76■□□□□ 0.27
CLIC1O00299 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLIC1O00299 AC034232.1-201ENST00000506026 1064 ntBASIC16.76■□□□□ 0.27
CLIC1O00299 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.76■□□□□ 0.27
CLIC1O00299 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.76■□□□□ 0.27
CLIC1O00299 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLIC1O00299 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLIC1O00299 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLIC1O00299 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CLIC1O00299 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLIC1O00299 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CLIC1O00299 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLIC1O00299 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLIC1O00299 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CLIC1O00299 KRT8P47-201ENST00000604727 1398 ntBASIC16.76■□□□□ 0.27
CLIC1O00299 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLIC1O00299 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CLIC1O00299 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CLIC1O00299 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CLIC1O00299 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLIC1O00299 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.75■□□□□ 0.27
CLIC1O00299 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CLIC1O00299 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLIC1O00299 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.75■□□□□ 0.27
CLIC1O00299 AC084018.2-201ENST00000613093 2607 ntBASIC16.75■□□□□ 0.27
CLIC1O00299 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLIC1O00299 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLIC1O00299 AL121761.2-201ENST00000598007 1648 ntBASIC16.75■□□□□ 0.27
CLIC1O00299 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLIC1O00299 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLIC1O00299 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.75■□□□□ 0.27
CLIC1O00299 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CLIC1O00299 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.75■□□□□ 0.27
CLIC1O00299 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CLIC1O00299 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.75■□□□□ 0.27
CLIC1O00299 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.75■□□□□ 0.27
CLIC1O00299 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLIC1O00299 GCSHP2-201ENST00000560971 527 ntBASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms