Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
NACAE9PAV3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC13.02□□□□□ -0.33
NACAE9PAV3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
NACAE9PAV3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
NACAE9PAV3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NACAE9PAV3 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC13.02□□□□□ -0.33
NACAE9PAV3 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC13.02□□□□□ -0.33
NACAE9PAV3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC13.02□□□□□ -0.33
NACAE9PAV3 CD81-212ENST00000526072 1172 ntTSL 5 BASIC13.02□□□□□ -0.33
NACAE9PAV3 AC104390.1-201ENST00000555663 520 ntBASIC13.02□□□□□ -0.33
NACAE9PAV3 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC13.02□□□□□ -0.33
NACAE9PAV3 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC13.02□□□□□ -0.33
NACAE9PAV3 AC069148.1-201ENST00000608741 768 ntBASIC13.02□□□□□ -0.33
NACAE9PAV3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
NACAE9PAV3 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.33
NACAE9PAV3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
NACAE9PAV3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NACAE9PAV3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
NACAE9PAV3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
NACAE9PAV3 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC13.02□□□□□ -0.33
NACAE9PAV3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC13.02□□□□□ -0.33
NACAE9PAV3 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
NACAE9PAV3 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NACAE9PAV3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC13.02□□□□□ -0.33
NACAE9PAV3 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NACAE9PAV3 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.02□□□□□ -0.33
NACAE9PAV3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NACAE9PAV3 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NACAE9PAV3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NACAE9PAV3 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NACAE9PAV3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
NACAE9PAV3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
NACAE9PAV3 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
NACAE9PAV3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NACAE9PAV3 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NACAE9PAV3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
NACAE9PAV3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC13.01□□□□□ -0.33
NACAE9PAV3 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NACAE9PAV3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
NACAE9PAV3 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NACAE9PAV3 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC13.01□□□□□ -0.33
NACAE9PAV3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC13.01□□□□□ -0.33
NACAE9PAV3 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
NACAE9PAV3 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NACAE9PAV3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
NACAE9PAV3 TSPY5P-201ENST00000426936 936 ntBASIC13.01□□□□□ -0.33
NACAE9PAV3 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC13.01□□□□□ -0.33
NACAE9PAV3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC13.01□□□□□ -0.33
NACAE9PAV3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC13.01□□□□□ -0.33
NACAE9PAV3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC13.01□□□□□ -0.33
NACAE9PAV3 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
NACAE9PAV3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC13.01□□□□□ -0.33
NACAE9PAV3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
NACAE9PAV3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NACAE9PAV3 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC13.01□□□□□ -0.33
NACAE9PAV3 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
NACAE9PAV3 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
NACAE9PAV3 AP000997.3-201ENST00000623333 2250 ntBASIC13.01□□□□□ -0.33
NACAE9PAV3 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
NACAE9PAV3 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
NACAE9PAV3 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NACAE9PAV3 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NACAE9PAV3 FLJ13224-201ENST00000313737 1514 ntBASIC13.01□□□□□ -0.33
NACAE9PAV3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NACAE9PAV3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NACAE9PAV3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
NACAE9PAV3 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC13.01□□□□□ -0.33
NACAE9PAV3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NACAE9PAV3 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC13.01□□□□□ -0.33
NACAE9PAV3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
NACAE9PAV3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC13.01□□□□□ -0.33
NACAE9PAV3 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
NACAE9PAV3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC13.01□□□□□ -0.33
NACAE9PAV3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NACAE9PAV3 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NACAE9PAV3 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NACAE9PAV3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC13.01□□□□□ -0.33
NACAE9PAV3 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NACAE9PAV3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC13.01□□□□□ -0.33
NACAE9PAV3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NACAE9PAV3 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NACAE9PAV3 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NACAE9PAV3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NACAE9PAV3 AL512604.3-201ENST00000569583 964 ntBASIC13.01□□□□□ -0.33
NACAE9PAV3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC13.01□□□□□ -0.33
NACAE9PAV3 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC13.01□□□□□ -0.33
NACAE9PAV3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NACAE9PAV3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NACAE9PAV3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC13.01□□□□□ -0.33
NACAE9PAV3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
NACAE9PAV3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NACAE9PAV3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC13.01□□□□□ -0.33
NACAE9PAV3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NACAE9PAV3 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC13.01□□□□□ -0.33
NACAE9PAV3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NACAE9PAV3 AL645608.8-201ENST00000606034 2086 ntBASIC13.01□□□□□ -0.33
NACAE9PAV3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC13.01□□□□□ -0.33
NACAE9PAV3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
NACAE9PAV3 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NACAE9PAV3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms