Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
NPIPB4C9JG80 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.71■□□□□ 0.11
NPIPB4C9JG80 IGHV3-41-201ENST00000613121 348 ntBASIC15.71■□□□□ 0.11
NPIPB4C9JG80 AC116407.4-201ENST00000623319 1061 ntBASIC15.71■□□□□ 0.11
NPIPB4C9JG80 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPB4C9JG80 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.71■□□□□ 0.11
NPIPB4C9JG80 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.71■□□□□ 0.11
NPIPB4C9JG80 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.71■□□□□ 0.11
NPIPB4C9JG80 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.71■□□□□ 0.11
NPIPB4C9JG80 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPB4C9JG80 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPB4C9JG80 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.71■□□□□ 0.11
NPIPB4C9JG80 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.71■□□□□ 0.11
NPIPB4C9JG80 LYSMD4-203ENST00000378904 2122 ntBASIC15.71■□□□□ 0.11
NPIPB4C9JG80 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPB4C9JG80 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.71■□□□□ 0.11
NPIPB4C9JG80 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NPIPB4C9JG80 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
NPIPB4C9JG80 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.71■□□□□ 0.1
NPIPB4C9JG80 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NPIPB4C9JG80 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
NPIPB4C9JG80 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPB4C9JG80 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPB4C9JG80 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
NPIPB4C9JG80 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPB4C9JG80 CROCCP2-202ENST00000412962 2773 ntBASIC15.7■□□□□ 0.1
NPIPB4C9JG80 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.7■□□□□ 0.1
NPIPB4C9JG80 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.7■□□□□ 0.1
NPIPB4C9JG80 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPB4C9JG80 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPB4C9JG80 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.7■□□□□ 0.1
NPIPB4C9JG80 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPB4C9JG80 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPB4C9JG80 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.7■□□□□ 0.1
NPIPB4C9JG80 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPB4C9JG80 FAM220CP-201ENST00000395253 831 ntBASIC15.7■□□□□ 0.1
NPIPB4C9JG80 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPB4C9JG80 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.7■□□□□ 0.1
NPIPB4C9JG80 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.7■□□□□ 0.1
NPIPB4C9JG80 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
NPIPB4C9JG80 NTF6B-201ENST00000591913 560 ntBASIC15.7■□□□□ 0.1
NPIPB4C9JG80 AC019129.2-201ENST00000609837 1235 ntBASIC15.7■□□□□ 0.1
NPIPB4C9JG80 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.7■□□□□ 0.1
NPIPB4C9JG80 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPB4C9JG80 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPB4C9JG80 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPB4C9JG80 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.7■□□□□ 0.1
NPIPB4C9JG80 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.7■□□□□ 0.1
NPIPB4C9JG80 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPB4C9JG80 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPB4C9JG80 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.7■□□□□ 0.1
NPIPB4C9JG80 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPB4C9JG80 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPB4C9JG80 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
NPIPB4C9JG80 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
NPIPB4C9JG80 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
NPIPB4C9JG80 AC108860.2-201ENST00000562760 2183 ntBASIC15.69■□□□□ 0.1
NPIPB4C9JG80 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPB4C9JG80 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.69■□□□□ 0.1
NPIPB4C9JG80 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPB4C9JG80 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPB4C9JG80 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.69■□□□□ 0.1
NPIPB4C9JG80 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPB4C9JG80 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.69■□□□□ 0.1
NPIPB4C9JG80 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.69■□□□□ 0.1
NPIPB4C9JG80 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPB4C9JG80 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPB4C9JG80 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPB4C9JG80 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
NPIPB4C9JG80 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.69■□□□□ 0.1
NPIPB4C9JG80 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.69■□□□□ 0.1
NPIPB4C9JG80 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.69■□□□□ 0.1
NPIPB4C9JG80 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.69■□□□□ 0.1
NPIPB4C9JG80 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.69■□□□□ 0.1
NPIPB4C9JG80 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPB4C9JG80 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
NPIPB4C9JG80 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPB4C9JG80 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPB4C9JG80 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPB4C9JG80 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPB4C9JG80 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
NPIPB4C9JG80 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
NPIPB4C9JG80 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
NPIPB4C9JG80 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPB4C9JG80 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NPIPB4C9JG80 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
NPIPB4C9JG80 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.68■□□□□ 0.1
NPIPB4C9JG80 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.68■□□□□ 0.1
NPIPB4C9JG80 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPB4C9JG80 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.68■□□□□ 0.1
NPIPB4C9JG80 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.68■□□□□ 0.1
NPIPB4C9JG80 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NPIPB4C9JG80 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPB4C9JG80 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPB4C9JG80 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NPIPB4C9JG80 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.68■□□□□ 0.1
NPIPB4C9JG80 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPB4C9JG80 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPB4C9JG80 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPB4C9JG80 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms