Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SRRM4A7MD48 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SRRM4A7MD48 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SRRM4A7MD48 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SRRM4A7MD48 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SRRM4A7MD48 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SRRM4A7MD48 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SRRM4A7MD48 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SRRM4A7MD48 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC14.32□□□□□ -0.12
SRRM4A7MD48 AC068472.1-201ENST00000474589 881 ntBASIC14.32□□□□□ -0.12
SRRM4A7MD48 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.32□□□□□ -0.12
SRRM4A7MD48 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC14.32□□□□□ -0.12
SRRM4A7MD48 VENTXP5-201ENST00000523979 775 ntBASIC14.32□□□□□ -0.12
SRRM4A7MD48 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC14.32□□□□□ -0.12
SRRM4A7MD48 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.32□□□□□ -0.12
SRRM4A7MD48 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.32□□□□□ -0.12
SRRM4A7MD48 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.32□□□□□ -0.12
SRRM4A7MD48 AC005332.3-201ENST00000589904 676 ntBASIC14.32□□□□□ -0.12
SRRM4A7MD48 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.32□□□□□ -0.12
SRRM4A7MD48 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SRRM4A7MD48 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.32□□□□□ -0.12
SRRM4A7MD48 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SRRM4A7MD48 HLA-J-201ENST00000462773 1622 ntBASIC14.32□□□□□ -0.12
SRRM4A7MD48 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SRRM4A7MD48 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.32□□□□□ -0.12
SRRM4A7MD48 AC080080.1-201ENST00000625121 2420 ntBASIC14.32□□□□□ -0.12
SRRM4A7MD48 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SRRM4A7MD48 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SRRM4A7MD48 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
SRRM4A7MD48 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
SRRM4A7MD48 LINC01311-201ENST00000565162 1445 ntBASIC14.32□□□□□ -0.12
SRRM4A7MD48 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SRRM4A7MD48 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SRRM4A7MD48 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC14.31□□□□□ -0.12
SRRM4A7MD48 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SRRM4A7MD48 AL138688.1-201ENST00000624851 1594 ntBASIC14.31□□□□□ -0.12
SRRM4A7MD48 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SRRM4A7MD48 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC14.31□□□□□ -0.12
SRRM4A7MD48 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SRRM4A7MD48 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SRRM4A7MD48 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SRRM4A7MD48 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SRRM4A7MD48 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC14.31□□□□□ -0.12
SRRM4A7MD48 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SRRM4A7MD48 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC14.31□□□□□ -0.12
SRRM4A7MD48 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SRRM4A7MD48 DDX43P3-201ENST00000441064 443 ntBASIC14.31□□□□□ -0.12
SRRM4A7MD48 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SRRM4A7MD48 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC14.31□□□□□ -0.12
SRRM4A7MD48 RNF126P1-202ENST00000569893 925 ntBASIC14.31□□□□□ -0.12
SRRM4A7MD48 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC14.31□□□□□ -0.12
SRRM4A7MD48 GPR32P1-201ENST00000601788 811 ntBASIC14.31□□□□□ -0.12
SRRM4A7MD48 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.31□□□□□ -0.12
SRRM4A7MD48 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SRRM4A7MD48 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
SRRM4A7MD48 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SRRM4A7MD48 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC14.31□□□□□ -0.12
SRRM4A7MD48 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SRRM4A7MD48 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SRRM4A7MD48 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SRRM4A7MD48 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SRRM4A7MD48 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SRRM4A7MD48 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SRRM4A7MD48 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SRRM4A7MD48 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SRRM4A7MD48 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.3□□□□□ -0.12
SRRM4A7MD48 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SRRM4A7MD48 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SRRM4A7MD48 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SRRM4A7MD48 CROCCP2-202ENST00000412962 2773 ntBASIC14.3□□□□□ -0.12
SRRM4A7MD48 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.3□□□□□ -0.12
SRRM4A7MD48 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SRRM4A7MD48 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SRRM4A7MD48 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SRRM4A7MD48 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SRRM4A7MD48 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC14.3□□□□□ -0.12
SRRM4A7MD48 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SRRM4A7MD48 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.3□□□□□ -0.12
SRRM4A7MD48 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SRRM4A7MD48 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.3□□□□□ -0.12
SRRM4A7MD48 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SRRM4A7MD48 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
SRRM4A7MD48 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SRRM4A7MD48 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SRRM4A7MD48 RCN1P1-201ENST00000400413 996 ntBASIC14.3□□□□□ -0.12
SRRM4A7MD48 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC14.3□□□□□ -0.12
SRRM4A7MD48 SPDYE13P-201ENST00000445314 798 ntBASIC14.3□□□□□ -0.12
SRRM4A7MD48 AC092647.4-201ENST00000457211 535 ntBASIC14.3□□□□□ -0.12
SRRM4A7MD48 AC063952.2-201ENST00000498792 1227 ntBASIC14.3□□□□□ -0.12
SRRM4A7MD48 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SRRM4A7MD48 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.3□□□□□ -0.12
SRRM4A7MD48 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.3□□□□□ -0.12
SRRM4A7MD48 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SRRM4A7MD48 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SRRM4A7MD48 LINC01451-201ENST00000623792 534 ntBASIC14.3□□□□□ -0.12
SRRM4A7MD48 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SRRM4A7MD48 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SRRM4A7MD48 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SRRM4A7MD48 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SRRM4A7MD48 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms