Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01548A6NM66 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.02□□□□□ -0.17
LINC01548A6NM66 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01548A6NM66 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.02□□□□□ -0.17
LINC01548A6NM66 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.02□□□□□ -0.17
LINC01548A6NM66 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.02□□□□□ -0.17
LINC01548A6NM66 KRT16P4-201ENST00000453883 522 ntBASIC14.02□□□□□ -0.17
LINC01548A6NM66 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.02□□□□□ -0.17
LINC01548A6NM66 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.02□□□□□ -0.17
LINC01548A6NM66 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.02□□□□□ -0.17
LINC01548A6NM66 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.02□□□□□ -0.17
LINC01548A6NM66 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.02□□□□□ -0.17
LINC01548A6NM66 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.02□□□□□ -0.17
LINC01548A6NM66 AL591684.3-201ENST00000605187 298 ntBASIC14.02□□□□□ -0.17
LINC01548A6NM66 IFNL4P1-201ENST00000607083 540 ntBASIC14.02□□□□□ -0.17
LINC01548A6NM66 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.02□□□□□ -0.17
LINC01548A6NM66 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
LINC01548A6NM66 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01548A6NM66 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01548A6NM66 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01548A6NM66 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC14.02□□□□□ -0.17
LINC01548A6NM66 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01548A6NM66 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01548A6NM66 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01548A6NM66 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.02□□□□□ -0.17
LINC01548A6NM66 HTR7P1-202ENST00000624664 4411 ntBASIC14.01□□□□□ -0.17
LINC01548A6NM66 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC01548A6NM66 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01548A6NM66 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01548A6NM66 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LINC01548A6NM66 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01548A6NM66 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC01548A6NM66 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
LINC01548A6NM66 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
LINC01548A6NM66 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01548A6NM66 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
LINC01548A6NM66 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LINC01548A6NM66 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC01548A6NM66 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
LINC01548A6NM66 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01548A6NM66 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01548A6NM66 AC067852.2-201ENST00000590513 2313 ntBASIC14.01□□□□□ -0.17
LINC01548A6NM66 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01548A6NM66 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01548A6NM66 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01548A6NM66 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01548A6NM66 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC01548A6NM66 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC01548A6NM66 AC132008.2-207ENST00000454517 770 ntBASIC14.01□□□□□ -0.17
LINC01548A6NM66 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01548A6NM66 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
LINC01548A6NM66 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.01□□□□□ -0.17
LINC01548A6NM66 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC14.01□□□□□ -0.17
LINC01548A6NM66 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.01□□□□□ -0.17
LINC01548A6NM66 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC01548A6NM66 AC011467.2-201ENST00000598425 242 ntBASIC14.01□□□□□ -0.17
LINC01548A6NM66 AL121894.2-201ENST00000602977 491 ntBASIC14.01□□□□□ -0.17
LINC01548A6NM66 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.01□□□□□ -0.17
LINC01548A6NM66 AC114341.1-201ENST00000618070 349 ntBASIC14.01□□□□□ -0.17
LINC01548A6NM66 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01548A6NM66 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC01548A6NM66 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC01548A6NM66 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
LINC01548A6NM66 INTS4P1-201ENST00000438455 1935 ntBASIC14.01□□□□□ -0.17
LINC01548A6NM66 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01548A6NM66 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01548A6NM66 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01548A6NM66 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC01548A6NM66 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01548A6NM66 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC01548A6NM66 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC01548A6NM66 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC01548A6NM66 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01548A6NM66 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC01548A6NM66 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14□□□□□ -0.17
LINC01548A6NM66 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01548A6NM66 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14□□□□□ -0.17
LINC01548A6NM66 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01548A6NM66 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC01548A6NM66 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01548A6NM66 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC01548A6NM66 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01548A6NM66 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01548A6NM66 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC01548A6NM66 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01548A6NM66 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14□□□□□ -0.17
LINC01548A6NM66 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01548A6NM66 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01548A6NM66 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14□□□□□ -0.17
LINC01548A6NM66 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC01548A6NM66 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14□□□□□ -0.17
LINC01548A6NM66 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14□□□□□ -0.17
LINC01548A6NM66 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14□□□□□ -0.17
LINC01548A6NM66 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01548A6NM66 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14□□□□□ -0.17
LINC01548A6NM66 EMBP1-201ENST00000458200 901 ntBASIC14□□□□□ -0.17
LINC01548A6NM66 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14□□□□□ -0.17
LINC01548A6NM66 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LINC01548A6NM66 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC01548A6NM66 SIRPAP1-201ENST00000448467 1770 ntBASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms