Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 INGX-201ENST00000359239 846 ntBASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 GAD2-202ENST00000376248 680 ntTSL 5 BASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 AC009947.2-201ENST00000444014 672 ntBASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 AL355075.4-201ENST00000554988 638 ntBASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 NEK4P2-201ENST00000580004 1012 ntBASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 AC092865.7-201ENST00000641832 219 ntBASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-7A0A0A0MS04 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 NT5C-210ENST00000582160 860 ntTSL 2 BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-7A0A0A0MS04 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms