Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 ECEL1P3-201ENST00000427961 737 ntBASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 AL031432.5-201ENST00000641059 760 ntBASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 PCDHA12-202ENST00000613593 2588 ntBASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 AC018695.7-201ENST00000624587 2492 ntBASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 KRT89P-201ENST00000620027 1478 ntBASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV30A0A087WSZ9 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV30A0A087WSZ9 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV30A0A087WSZ9 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV30A0A087WSZ9 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
TRAV30A0A087WSZ9 KRT8P9-201ENST00000558927 1449 ntBASIC13.99□□□□□ -0.17
TRAV30A0A087WSZ9 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TRAV30A0A087WSZ9 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC13.99□□□□□ -0.17
TRAV30A0A087WSZ9 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAV30A0A087WSZ9 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms