Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC23.12■■□□□ 1.29
SPG7Q9UQ90 MIR4751-201ENST00000578027 74 ntBASIC23.12■■□□□ 1.29
SPG7Q9UQ90 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SPG7Q9UQ90 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
SPG7Q9UQ90 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC23.12■■□□□ 1.29
SPG7Q9UQ90 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC23.12■■□□□ 1.29
SPG7Q9UQ90 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC23.12■■□□□ 1.29
SPG7Q9UQ90 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SPG7Q9UQ90 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC23.11■■□□□ 1.29
SPG7Q9UQ90 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SPG7Q9UQ90 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SPG7Q9UQ90 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SPG7Q9UQ90 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SPG7Q9UQ90 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC23.11■■□□□ 1.29
SPG7Q9UQ90 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SPG7Q9UQ90 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SPG7Q9UQ90 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SPG7Q9UQ90 PRSS29P-201ENST00000440800 595 ntBASIC23.11■■□□□ 1.29
SPG7Q9UQ90 AP006288.1-201ENST00000446065 395 ntBASIC23.11■■□□□ 1.29
SPG7Q9UQ90 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC23.11■■□□□ 1.29
SPG7Q9UQ90 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC23.11■■□□□ 1.29
SPG7Q9UQ90 AC005829.1-201ENST00000570002 483 ntBASIC23.11■■□□□ 1.29
SPG7Q9UQ90 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC23.11■■□□□ 1.29
SPG7Q9UQ90 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC23.11■■□□□ 1.29
SPG7Q9UQ90 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC23.11■■□□□ 1.29
SPG7Q9UQ90 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SPG7Q9UQ90 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC23.11■■□□□ 1.29
SPG7Q9UQ90 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SPG7Q9UQ90 PC-208ENST00000529047 1607 ntTSL 3 BASIC23.11■■□□□ 1.29
SPG7Q9UQ90 AC093677.2-201ENST00000600169 1863 ntBASIC23.11■■□□□ 1.29
SPG7Q9UQ90 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SPG7Q9UQ90 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SPG7Q9UQ90 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
SPG7Q9UQ90 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SPG7Q9UQ90 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SPG7Q9UQ90 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC23.1■■□□□ 1.29
SPG7Q9UQ90 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SPG7Q9UQ90 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC23.1■■□□□ 1.29
SPG7Q9UQ90 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SPG7Q9UQ90 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SPG7Q9UQ90 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SPG7Q9UQ90 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SPG7Q9UQ90 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC23.1■■□□□ 1.29
SPG7Q9UQ90 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC23.1■■□□□ 1.29
SPG7Q9UQ90 HCG4B-203ENST00000450128 991 ntBASIC23.1■■□□□ 1.29
SPG7Q9UQ90 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC23.1■■□□□ 1.29
SPG7Q9UQ90 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC23.1■■□□□ 1.29
SPG7Q9UQ90 STK25P1-201ENST00000585406 838 ntBASIC23.1■■□□□ 1.29
SPG7Q9UQ90 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC23.1■■□□□ 1.29
SPG7Q9UQ90 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
SPG7Q9UQ90 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SPG7Q9UQ90 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SPG7Q9UQ90 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC23.1■■□□□ 1.29
SPG7Q9UQ90 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SPG7Q9UQ90 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SPG7Q9UQ90 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SPG7Q9UQ90 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SPG7Q9UQ90 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
SPG7Q9UQ90 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SPG7Q9UQ90 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SPG7Q9UQ90 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC23.09■■□□□ 1.29
SPG7Q9UQ90 BX276092.7-203ENST00000637198 1536 ntBASIC23.09■■□□□ 1.29
SPG7Q9UQ90 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SPG7Q9UQ90 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC23.09■■□□□ 1.29
SPG7Q9UQ90 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC23.09■■□□□ 1.29
SPG7Q9UQ90 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
SPG7Q9UQ90 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC23.09■■□□□ 1.29
SPG7Q9UQ90 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SPG7Q9UQ90 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC23.09■■□□□ 1.29
SPG7Q9UQ90 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SPG7Q9UQ90 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC23.09■■□□□ 1.29
SPG7Q9UQ90 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC23.09■■□□□ 1.29
SPG7Q9UQ90 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC23.09■■□□□ 1.29
SPG7Q9UQ90 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SPG7Q9UQ90 AC092865.6-201ENST00000642101 219 ntBASIC23.09■■□□□ 1.29
SPG7Q9UQ90 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC23.09■■□□□ 1.29
SPG7Q9UQ90 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SPG7Q9UQ90 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SPG7Q9UQ90 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC23.09■■□□□ 1.29
SPG7Q9UQ90 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SPG7Q9UQ90 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SPG7Q9UQ90 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
SPG7Q9UQ90 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC23.09■■□□□ 1.29
SPG7Q9UQ90 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SPG7Q9UQ90 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC23.08■■□□□ 1.29
SPG7Q9UQ90 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SPG7Q9UQ90 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC23.08■■□□□ 1.29
SPG7Q9UQ90 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC23.08■■□□□ 1.29
SPG7Q9UQ90 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SPG7Q9UQ90 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC23.08■■□□□ 1.29
SPG7Q9UQ90 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
SPG7Q9UQ90 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC23.08■■□□□ 1.29
SPG7Q9UQ90 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC23.08■■□□□ 1.29
SPG7Q9UQ90 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC23.08■■□□□ 1.29
SPG7Q9UQ90 DDX43P3-201ENST00000441064 443 ntBASIC23.08■■□□□ 1.29
SPG7Q9UQ90 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC23.08■■□□□ 1.29
SPG7Q9UQ90 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SPG7Q9UQ90 YBX1P5-201ENST00000509441 847 ntBASIC23.08■■□□□ 1.29
SPG7Q9UQ90 STK19B-204ENST00000512515 211 ntBASIC23.08■■□□□ 1.29
SPG7Q9UQ90 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms